HHsearch alignment for GI: 254780941 and conserved domain: KOG0078
>KOG0078 consensus.
Probab=99.17 E-value=3.7e-10 Score=85.57 Aligned_cols=156 Identities=22% Similarity=0.248 Sum_probs=100.2
Q ss_pred CCCCEE-EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEE---EEEEEEEECCE--EEEEEECCCCHHHCCCCCCCCC
Q ss_conf 851218-99833899868899999868920210588886021---27899973994--8999987984010123575321
Q gi|254780941|r 19 NSRSGC-VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRS---IVRGIVSEKES--QIVFLDTPGIFNAKDSYHKLMI 92 (311)
Q Consensus 19 ~~ksg~-VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~---~i~gi~~~~~~--qiifvDTPG~~~~~~~l~~~~~ 92 (311)
T Consensus 8 ~~d~~~kvlliGDs~vGKt~~l~rf~d~~f~--~~~-~sTiGIDFk~kt-i~l~g~~i~lQiWDtaG--------Qerf~ 75 (207)
T KOG0078 8 DYDYLFKLLLIGDSGVGKTCLLLRFSDDSFN--TSF-ISTIGIDFKIKT-IELDGKKIKLQIWDTAG--------QERFR 75 (207)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHCCCC--CCC-CCEEEEEEEEEE-EEECCEEEEEEEEECCC--------CHHHH
T ss_conf 8451899999778987655766654406676--776-515878878889-98389089999997243--------05678
Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHH-CCHHHHHHHH---HHCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCC
Q ss_conf 002345555321001100001000-0000122345---4428720257872110104345-7888864100123343110
Q gi|254780941|r 93 RLSWSTIKHADIVCLVVDSHRELK-VNIHDLLKEI---AKRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMV 167 (311)
Q Consensus 93 ~~~~~~l~~aDiil~VvDa~~~~~-~~~~~il~~l---~~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~I 167 (311)
T Consensus 76 ti~~sYyrgA~gi~LvyDitne~Sfeni~~W~~~I~e~a~~~v~~~LvGNK~D~~~~R~V~~e~ge~lA~e~G~-~F~Et 154 (207)
T KOG0078 76 TITTAYYRGAMGILLVYDITNEKSFENIRNWIKNIDEHASDDVVKILVGNKCDLEEKRQVSKERGEALAREYGI-KFFET 154 (207)
T ss_pred HHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCC-EEEEC
T ss_conf 89999986548249999845257777799999999863788874898511412101333567999999998498-27971
Q ss_pred CCCCCCCHHHHHHHHHHHCC
Q ss_conf 00138742678999998366
Q gi|254780941|r 168 SATKGHGCDDVLNYLCSTLP 187 (311)
Q Consensus 168 SAk~g~Gid~L~~~L~~~lp 187 (311)
T Consensus 155 SAk~~~NI~eaF~~La~~i~ 174 (207)
T KOG0078 155 SAKTNFNIEEAFLSLARDIL 174 (207)
T ss_pred CCCCCCCHHHHHHHHHHHHH
T ss_conf 33679988999999999998