HHsearch alignment for GI: 254780941 and conserved domain: KOG0090

Probab=98.77  E-value=1.3e-08  Score=75.68  Aligned_cols=112  Identities=21%  Similarity=0.283  Sum_probs=70.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89983389986889999986892021058888602127899973994899998798401012357532100234555532
Q gi|254780941|r   24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHAD  103 (311)
Q Consensus        24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aD  103 (311)
T Consensus        40 ~Vll~Gl~dSGKT~LF~qL~~gs~----~~TvtSiepn~a~~r~gs~~~~LVD~PGH~rlR~kl~e~~~~~-----~~ak  110 (238)
T KOG0090          40 AVLLVGLSDSGKTSLFTQLITGSH----RGTVTSIEPNEATYRLGSENVTLVDLPGHSRLRRKLLEYLKHN-----YSAK  110 (238)
T ss_pred             CEEEEECCCCCCEEEEEEHHCCCC----CCEEEEECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCC-----CCCE
T ss_conf             689993278983355420013873----6703210466135763686238875799588999999873465-----5221


Q ss_pred             HHCCCCHHHHHHH---CC---HHHHHHHH--HHCCCCCEEEEEECCCHH
Q ss_conf             1001100001000---00---00122345--442872025787211010
Q gi|254780941|r  104 IVCLVVDSHRELK---VN---IHDLLKEI--AKRSSRLILILNKIDCVK  144 (311)
Q Consensus       104 iil~VvDa~~~~~---~~---~~~il~~l--~~~~~p~IiVlNKiDlv~  144 (311)
T Consensus       111 aiVFVVDSa~f~k~vrdvaefLydil~~~~~~~~~~~vLIaCNKqDl~t  159 (238)
T KOG0090         111 AIVFVVDSATFLKNVRDVAEFLYDILLDSRVKKNKPPVLIACNKQDLFT  159 (238)
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
T ss_conf             5999983322460067999999999986012347998899955522321