HHsearch alignment for GI: 254780941 and conserved domain: KOG0393
>KOG0393 consensus.
Probab=97.67 E-value=9.7e-05 Score=50.53 Aligned_cols=156 Identities=19% Similarity=0.170 Sum_probs=91.7
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEC-CE--EEEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf 121899833899868899999868920210588886021278999739-94--899998798401012357532100234
Q gi|254780941|r 21 RSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEK-ES--QIVFLDTPGIFNAKDSYHKLMIRLSWS 97 (311)
Q Consensus 21 ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~-~~--qiifvDTPG~~~~~~~l~~~~~~~~~~ 97 (311)
T Consensus 3 ~~~K~VvVGDga~GKT~ll~~~t~~~-fp~~yvP-TVFdnys~~v~V~dg~~v~L~LwDTAGqed----YDr-l-R-pl- 72 (198)
T KOG0393 3 RRIKCVVVGDGAVGKTCLLISYTTNA-FPEEYVP-TVFDNYSANVTVDDGKPVELGLWDTAGQED----YDR-L-R-PL- 72 (198)
T ss_pred EEEEEEEECCCCCCCEEEEEEECCCC-CCCCCCC-EEECCCEEEEEECCCCEEEEEEEECCCCCC----CCC-C-C-CC-
T ss_conf 03699998988767458898843576-8665456-387562389996489789986331479730----113-3-6-36-
Q ss_pred HHHHHHHHCCCCHHHHHHHCC--HHHHHHHHHH--CCCCCEEEEEECCCHHHHHHH-------------HHHHHHHHCCC
Q ss_conf 555532100110000100000--0012234544--287202578721101043457-------------88886410012
Q gi|254780941|r 98 TIKHADIVCLVVDSHRELKVN--IHDLLKEIAK--RSSRLILILNKIDCVKPERLL-------------EQAEIANKLVF 160 (311)
Q Consensus 98 ~l~~aDiil~VvDa~~~~~~~--~~~il~~l~~--~~~p~IiVlNKiDlv~~~~l~-------------~~~~~~~~~~~ 160 (311)
T Consensus 73 sY~~tdvfl~cfsv~~p~S~~nv~~kW~pEi~~~cp~vpiiLVGtk~DLr~d~~~~~~l~~~~~~~Vt~~~g~~lA~~ig 152 (198)
T KOG0393 73 SYPQTDVFLLCFSVVSPESFENVKSKWIPEIKHHCPNVPIILVGTKADLRDDPSTLEKLQRQGLEPVTYEQGLELAKEIG 152 (198)
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 77888889999876982668887751068899638999889982127765387889998746578656789999999859
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 33431100013874267899999836
Q gi|254780941|r 161 IEKTFMVSATKGHGCDDVLNYLCSTL 186 (311)
Q Consensus 161 ~~~i~~ISAk~g~Gid~L~~~L~~~l 186 (311)
T Consensus 153 a~~y~EcSa~tq~~v~~vF~~a~~~~ 178 (198)
T KOG0393 153 AVKYLECSALTQKGVKEVFDEAIRAA 178 (198)
T ss_pred CCEEEEEHHHHHCCCHHHHHHHHHHH
T ss_conf 51123201756377188899999998