HHsearch alignment for GI: 254780941 and conserved domain: KOG0447
>KOG0447 consensus.
Probab=98.59 E-value=3.5e-07 Score=66.33 Aligned_cols=141 Identities=18% Similarity=0.292 Sum_probs=82.3
Q ss_pred HHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECC---------------CC---------------
Q ss_conf 765410143324368512189983389986889999986892021058---------------88---------------
Q gi|254780941|r 5 EITFFNEHKDFVQDNSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTH---------------KV--------------- 54 (311)
Q Consensus 5 e~~~~~~~~~~~~~~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~---------------k~--------------- 54 (311)
T Consensus 291 VLD~Ls~YD~sYnt~DhLPRVVVVGDQSaGKTSVLEmiAqARIFPRGSGEMMTRaPVKVTLsEGPyHVAqFrDSsREfDL 370 (980)
T KOG0447 291 VLDVLSDYDASYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDL 370 (980)
T ss_pred HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCHHHHHCCCCCCCCC
T ss_conf 99987254546651146862799756666622899999874307688853100377478814686034542465422465
Q ss_pred -----------------------CCEEEEEEEEEEE--CCEE-EEEEECCCCHHHCCC-C----CCCCCCHHHHHHHHHH
Q ss_conf -----------------------8602127899973--9948-999987984010123-5----7532100234555532
Q gi|254780941|r 55 -----------------------QTTRSIVRGIVSE--KESQ-IVFLDTPGIFNAKDS-Y----HKLMIRLSWSTIKHAD 103 (311)
Q Consensus 55 -----------------------~TTr~~i~gi~~~--~~~q-iifvDTPG~~~~~~~-l----~~~~~~~~~~~l~~aD 103 (311)
T Consensus 371 TKE~DLq~LR~e~E~RMr~sVr~GkTVSnEvIsltVKGPgLqRMVLVDLPGvIsTvT~dMA~dTKd~I~~msKayM~NPN 450 (980)
T KOG0447 371 TKEEDLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPN 450 (980)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 41557999988888998850357851451216897218996236886377325440023464316779999999745998
Q ss_pred HHCCCC-HHHHHH-HCCHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf 100110-000100-000001223454428720257872110104
Q gi|254780941|r 104 IVCLVV-DSHREL-KVNIHDLLKEIAKRSSRLILILNKIDCVKP 145 (311)
Q Consensus 104 iil~Vv-Da~~~~-~~~~~~il~~l~~~~~p~IiVlNKiDlv~~ 145 (311)
T Consensus 451 AIILCIQDGSVDAERSnVTDLVsq~DP~GrRTIfVLTKVDlAEk 494 (980)
T KOG0447 451 AIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEK 494 (980)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHH
T ss_conf 38999516873055513888987138778736999851115644