HHsearch alignment for GI: 254780941 and conserved domain: KOG0780
>KOG0780 consensus.
Probab=97.35 E-value=0.0004 Score=46.55 Aligned_cols=126 Identities=21% Similarity=0.336 Sum_probs=76.1
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHH------CCCEEEEC---CCC--------CCE--EEEEEEEEE---------
Q ss_conf 24368512189983389986889999986------89202105---888--------860--212789997---------
Q gi|254780941|r 15 FVQDNSRSGCVALVGATNAGKSTLVNRFV------GAKVSIVT---HKV--------QTT--RSIVRGIVS--------- 66 (311)
Q Consensus 15 ~~~~~~ksg~VaivG~pN~GKSTL~N~l~------g~~vsivS---~k~--------~TT--r~~i~gi~~--------- 66 (311)
T Consensus 94 ~~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~ 173 (483)
T KOG0780 94 LQPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTFRAGAFDQLKQNATKARVPFYGSYTEADPVKIAS 173 (483)
T ss_pred CCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHH
T ss_conf 66156897089998305788630089999999846872457760224530689999876740770684036655589999
Q ss_pred -------ECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf -------3994899998798401012357532100234555532100110000100000001223454428720257872
Q gi|254780941|r 67 -------EKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNK 139 (311)
Q Consensus 67 -------~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNK 139 (311)
T Consensus 174 egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~-~ai-~Pd~vi~VmDasiGQaae~--Qa~aFk~~vdvg~vIlTK 249 (483)
T KOG0780 174 EGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVS-KAI-KPDEIIFVMDASIGQAAEA--QARAFKETVDVGAVILTK 249 (483)
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HHC-CCCEEEEEEECCCCHHHHH--HHHHHHHHHCCCEEEEEE
T ss_conf 999988863972899827873012489999999998-515-9873899985620076799--999887761540379972
Q ss_pred CCCHH
Q ss_conf 11010
Q gi|254780941|r 140 IDCVK 144 (311)
Q Consensus 140 iDlv~ 144 (311)
T Consensus 250 lDGha 254 (483)
T KOG0780 250 LDGHA 254 (483)
T ss_pred CCCCC
T ss_conf 25677