HHsearch alignment for GI: 254780941 and conserved domain: KOG0780

>KOG0780 consensus.
Probab=97.35  E-value=0.0004  Score=46.55  Aligned_cols=126  Identities=21%  Similarity=0.336  Sum_probs=76.1

Q ss_pred             CCCCCCCCEEEEEECCCCCCHHHHHHHHH------CCCEEEEC---CCC--------CCE--EEEEEEEEE---------
Q ss_conf             24368512189983389986889999986------89202105---888--------860--212789997---------
Q gi|254780941|r   15 FVQDNSRSGCVALVGATNAGKSTLVNRFV------GAKVSIVT---HKV--------QTT--RSIVRGIVS---------   66 (311)
Q Consensus        15 ~~~~~~ksg~VaivG~pN~GKSTL~N~l~------g~~vsivS---~k~--------~TT--r~~i~gi~~---------   66 (311)
T Consensus        94 ~~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~  173 (483)
T KOG0780          94 LQPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTFRAGAFDQLKQNATKARVPFYGSYTEADPVKIAS  173 (483)
T ss_pred             CCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHH
T ss_conf             66156897089998305788630089999999846872457760224530689999876740770684036655589999


Q ss_pred             -------ECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             -------3994899998798401012357532100234555532100110000100000001223454428720257872
Q gi|254780941|r   67 -------EKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNK  139 (311)
Q Consensus        67 -------~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNK  139 (311)
T Consensus       174 egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~-~ai-~Pd~vi~VmDasiGQaae~--Qa~aFk~~vdvg~vIlTK  249 (483)
T KOG0780         174 EGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVS-KAI-KPDEIIFVMDASIGQAAEA--QARAFKETVDVGAVILTK  249 (483)
T ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HHC-CCCEEEEEEECCCCHHHHH--HHHHHHHHHCCCEEEEEE
T ss_conf             999988863972899827873012489999999998-515-9873899985620076799--999887761540379972


Q ss_pred             CCCHH
Q ss_conf             11010
Q gi|254780941|r  140 IDCVK  144 (311)
Q Consensus       140 iDlv~  144 (311)
T Consensus       250 lDGha  254 (483)
T KOG0780         250 LDGHA  254 (483)
T ss_pred             CCCCC
T ss_conf             25677