HHsearch alignment for GI: 254780941 and conserved domain: KOG1486

Probab=99.60  E-value=5e-15  Score=117.11  Aligned_cols=94  Identities=28%  Similarity=0.396  Sum_probs=75.6

Q ss_pred             CCCE--EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf             5121--89983389986889999986892021058888602127899973994899998798401012357532100234
Q gi|254780941|r   20 SRSG--CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWS   97 (311)
Q Consensus        20 ~ksg--~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~   97 (311)
T Consensus        58 ~KsGdaRValIGfPSVGKStlLs~iT~T~S-eaA~yeFTTLtcIpGvi~y~ga~IQllDLPGIieGAsq-gkGRGRQvia  135 (364)
T KOG1486          58 LKSGDARVALIGFPSVGKSTLLSKITSTHS-EAASYEFTTLTCIPGVIHYNGANIQLLDLPGIIEGASQ-GKGRGRQVIA  135 (364)
T ss_pred             ECCCCEEEEEECCCCCCHHHHHHHHHCCHH-HHHCCEEEEEEEECCEEEECCCEEEEECCCCCCCCCCC-CCCCCCEEEE
T ss_conf             315873799964887447878887641102-22110246787303168766834799627530002113-7887726888


Q ss_pred             HHHHHHHHCCCCHHHHHH
Q ss_conf             555532100110000100
Q gi|254780941|r   98 TIKHADIVCLVVDSHREL  115 (311)
Q Consensus        98 ~l~~aDiil~VvDa~~~~  115 (311)
T Consensus       136 vArtaDlilMvLDatk~e  153 (364)
T KOG1486         136 VARTADLILMVLDATKSE  153 (364)
T ss_pred             EEECCCEEEEEECCCCCH
T ss_conf             740365899995177615