HHsearch alignment for GI: 254780941 and conserved domain: KOG2743
>KOG2743 consensus.
Probab=97.17 E-value=0.00055 Score=45.65 Aligned_cols=137 Identities=22% Similarity=0.288 Sum_probs=70.0
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHC----CCEEEECCCCC--------------------------------CEEEE
Q ss_conf 3685121899833899868899999868----92021058888--------------------------------60212
Q gi|254780941|r 17 QDNSRSGCVALVGATNAGKSTLVNRFVG----AKVSIVTHKVQ--------------------------------TTRSI 60 (311)
Q Consensus 17 ~~~~ksg~VaivG~pN~GKSTL~N~l~g----~~vsivS~k~~--------------------------------TTr~~ 60 (311)
T Consensus 52 ~~~~rIPvtIITGyLGaGKtTLLn~Il~~~hgKRIAVIlNEfGes~die~sl~~~~~gg~lyEewv~L~NGClCCtVk~~ 131 (391)
T KOG2743 52 SLGARIPVTIITGYLGAGKTTLLNYILTGQHGKRIAVILNEFGESSDIEKSLAVSQEGGELYEEWVELRNGCLCCTVKDN 131 (391)
T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCH
T ss_conf 88884443999731467868999999716788559997010365011467777503441579999986488089985430
Q ss_pred -EEE----EEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC--------CHHHHHHHHH
Q ss_conf -789----997399489999879840101235753210023455553210011000010000--------0001223454
Q gi|254780941|r 61 -VRG----IVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKV--------NIHDLLKEIA 127 (311)
Q Consensus 61 -i~g----i~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~--------~~~~il~~l~ 127 (311)
T Consensus 132 gvraie~lvqkkGkfD~IllETTGlAnPaPia~~Fw~dd~l~sdVkLDGIVTvvD~K~~~~~Lde~k~~g~i~EA~~QiA 211 (391)
T KOG2743 132 GVRAIENLVQKKGKFDHILLETTGLANPAPIASMFWLDDELGSDVKLDGIVTVVDAKHILKHLDEEKPDGLINEATRQIA 211 (391)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 89999999846787646999604788827788887644654674043038999743668865312586541578888875
Q ss_pred HCCCCCEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 42872025787211010434578888641
Q gi|254780941|r 128 KRSSRLILILNKIDCVKPERLLEQAEIAN 156 (311)
Q Consensus 128 ~~~~p~IiVlNKiDlv~~~~l~~~~~~~~ 156 (311)
T Consensus 212 ~AD---~II~NKtDli~~e~~~~l~q~I~ 237 (391)
T KOG2743 212 LAD---RIIMNKTDLVSEEEVKKLRQRIR 237 (391)
T ss_pred HHH---EEEECCCCCCCHHHHHHHHHHHH
T ss_conf 411---35640435567789999999999