HHsearch alignment for GI: 254780941 and conserved domain: PRK01889
>PRK01889 ribosome-associated GTPase; Reviewed.
Probab=97.75 E-value=3.3e-05 Score=53.59 Aligned_cols=56 Identities=34% Similarity=0.496 Sum_probs=40.4
Q ss_pred EEEEECCCCCCHHHHHHHHHCCC---EEEECCC----CCCEEEEEEEEEEECCEEEEEEECCCCHH
Q ss_conf 89983389986889999986892---0210588----88602127899973994899998798401
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAK---VSIVTHK----VQTTRSIVRGIVSEKESQIVFLDTPGIFN 82 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~---vsivS~k----~~TTr~~i~gi~~~~~~qiifvDTPG~~~ 82 (311)
T Consensus 196 T~vl~G~SGVGKSTLiN~L~g~~~~~t~~is~~~~kGRHTTt~reL~~lp~Gg---~lIDTPG~Re 258 (353)
T PRK01889 196 TVALLGSSGVGKSTLVNALLGEEVQKTGAVREDDSKGRHTTTHRELHPLPSGG---LLIDTPGMRE 258 (353)
T ss_pred EEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCEEEEEECCCCC---EEEECCCCCC
T ss_conf 89997788866999998756534534415000369950012406899948995---8973798654