HHsearch alignment for GI: 254780941 and conserved domain: PRK04000
>PRK04000 translation initiation factor IF-2 subunit gamma; Validated.
Probab=99.73 E-value=2.6e-17 Score=131.87 Aligned_cols=159 Identities=24% Similarity=0.312 Sum_probs=112.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHCCCEEEE--CCCCCCEEE-----------------------EEE---EEEEECCEEEE
Q ss_conf 21899833899868899999868920210--588886021-----------------------278---99973994899
Q gi|254780941|r 22 SGCVALVGATNAGKSTLVNRFVGAKVSIV--THKVQTTRS-----------------------IVR---GIVSEKESQIV 73 (311)
Q Consensus 22 sg~VaivG~pN~GKSTL~N~l~g~~vsiv--S~k~~TTr~-----------------------~i~---gi~~~~~~qii 73 (311)
T Consensus 8 ~vNIgtiGHVDHGKTTLv~aLTg~~tdr~~eE~~RGiTI~LG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~is 87 (410)
T PRK04000 8 EVNIGMVGHVDHGKTTLVQALTGVWTDTHSEELKRGITIRLGYADATIYKCPNCEGPEAYTTEPTCPKCGSETELLRRVS 87 (410)
T ss_pred CCEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEE
T ss_conf 52699996517869999988739754238878864881210510100120545554441353023344455544331699
Q ss_pred EEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHH-HCCHHHHHHHHHHCCCC-CEEEEEECCCHHHHHHHHH
Q ss_conf 998798401012357532100234555532100110000100-00000122345442872-0257872110104345788
Q gi|254780941|r 74 FLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHREL-KVNIHDLLKEIAKRSSR-LILILNKIDCVKPERLLEQ 151 (311)
Q Consensus 74 fvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~-~~~~~~il~~l~~~~~p-~IiVlNKiDlv~~~~l~~~ 151 (311)
T Consensus 88 ~VD~PG--------He~fi~nMi~Gas~~D~alLVVaA~eG~p~pQT~EHl~i~~~lgi~~~iV~lnK~Dlv~~e~~~~~ 159 (410)
T PRK04000 88 FVDAPG--------HETLMATMLSGAALMDGAVLVIAANEPCPQPQTKEHLMALDIIGIKNIVIVQNKIDLVSKEKALEN 159 (410)
T ss_pred EEECCC--------HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH
T ss_conf 997988--------799999998402126679999865778767714999999998099837999962567898999999
Q ss_pred HHHHHHCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 88641001-----23343110001387426789999983662
Q gi|254780941|r 152 AEIANKLV-----FIEKTFMVSATKGHGCDDVLNYLCSTLPL 188 (311)
Q Consensus 152 ~~~~~~~~-----~~~~i~~ISAk~g~Gid~L~~~L~~~lpe 188 (311)
T Consensus 160 ~~ei~~~l~g~~~~~~piipvSa~~g~~i~~L~~~l~~~~~~ 201 (410)
T PRK04000 160 YEQIKEFVKGTVAENAPIIPVSALHGVNIDALIEAIEEEIPT 201 (410)
T ss_pred HHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCC
T ss_conf 999999870676568999996477788940899989862778