HHsearch alignment for GI: 254780941 and conserved domain: PRK10512
>PRK10512 selenocysteinyl-tRNA-specific translation factor; Provisional.
Probab=99.72 E-value=8.5e-17 Score=128.53 Aligned_cols=156 Identities=22% Similarity=0.274 Sum_probs=116.1
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEE--ECCCCCCEEEEEEEEEEECC-EEEEEEECCCCHHHCCCCCCCCCCHHHHHHH
Q ss_conf 89983389986889999986892021--05888860212789997399-4899998798401012357532100234555
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSI--VTHKVQTTRSIVRGIVSEKE-SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsi--vS~k~~TTr~~i~gi~~~~~-~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~ 100 (311)
T Consensus 2 IigTAGHVDHGKTsLvkALTG~dtDRL~EEk~RGiTIdLGFA~~~l~~g~~~g~VDVPG--------HErFIknMlAG~~ 73 (615)
T PRK10512 2 IIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVLGFIDVPG--------HEKFLSNMLAGVG 73 (615)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEEECEEEEECCCCCEEEEEECCC--------HHHHHHHHHHHHH
T ss_conf 89963654778999999986888656977897187277130755579997899987998--------3899999974464
Q ss_pred HHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCC-CEEEEEECCCHHHHHHHHHHHHHHHC-----CCCCCCCCCCCCCCCC
Q ss_conf 53210011000010000000122345442872-02578721101043457888864100-----1233431100013874
Q gi|254780941|r 101 HADIVCLVVDSHRELKVNIHDLLKEIAKRSSR-LILILNKIDCVKPERLLEQAEIANKL-----VFIEKTFMVSATKGHG 174 (311)
Q Consensus 101 ~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p-~IiVlNKiDlv~~~~l~~~~~~~~~~-----~~~~~i~~ISAk~g~G 174 (311)
T Consensus 74 gid~vlLVVAAdeGvMPQT~EHl~Il~lLgi~~giV~lTK~Dlvd~e~l~~v~~ei~~~l~~t~l~~~pi~~vSa~tg~G 153 (615)
T PRK10512 74 GIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARIDEVRRQVLEVLREYGFAEAKLFVTAATEGRG 153 (615)
T ss_pred HCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
T ss_conf 37889999988998772379999999981998289999776568979999999999999844787679752014566679
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 2678999998366
Q gi|254780941|r 175 CDDVLNYLCSTLP 187 (311)
Q Consensus 175 id~L~~~L~~~lp 187 (311)
T Consensus 154 i~~L~~~L~~l~~ 166 (615)
T PRK10512 154 IDALREHLLQLPE 166 (615)
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999986255