HHsearch alignment for GI: 254780941 and conserved domain: PRK11058
>PRK11058 putative GTPase HflX; Provisional.
Probab=99.94 E-value=9.8e-26 Score=186.38 Aligned_cols=203 Identities=23% Similarity=0.254 Sum_probs=135.6
Q ss_pred CCE--EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC-EEEEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf 121--8998338998688999998689202105888860212789997399-4899998798401012357532100234
Q gi|254780941|r 21 RSG--CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE-SQIVFLDTPGIFNAKDSYHKLMIRLSWS 97 (311)
Q Consensus 21 ksg--~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~-~qiifvDTPG~~~~~~~l~~~~~~~~~~ 97 (311)
T Consensus 194 ~~~~~~ValVGYTNAGKSTL~n~Lt~~~v~-~~d~LFATLD~t~R~~~l~~~~~~lltDTVGFI~---~LP~~LveAF~s 269 (426)
T PRK11058 194 KADVPTVSLVGYTNAGKSTLFNRITEARVY-AADQLFATLDPTLRRIDVADVGETVLADTVGFIR---HLPHDLVAAFKA 269 (426)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHH---HCCHHHHHHHHH
T ss_conf 069976999735777789998777528876-3254501478620267869998699971506665---198999999999
Q ss_pred H---HHHHHHHCCCCHHHHHHHC----CHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 5---5553210011000010000----00012234544287202578721101043457888864100123343110001
Q gi|254780941|r 98 T---IKHADIVCLVVDSHRELKV----NIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSAT 170 (311)
Q Consensus 98 ~---l~~aDiil~VvDa~~~~~~----~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk 170 (311)
T Consensus 270 TLeEv~~ADlLLhVvD~S~p~~~~q~~~v~~vL~elg~~~~p~i~V~NKiD~~~~~~--~~~~~~~--~~~p~~V~iSA~ 345 (426)
T PRK11058 270 TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLDDFE--PRIDRDE--ENKPIRVWLSAQ 345 (426)
T ss_pred HHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHH--HHHHHHH--CCCCCEEEEECC
T ss_conf 999996398899998499937999999999999975999997799997702389644--5566653--399877999789
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEE
Q ss_conf 387426789999983662235689643343025678998759999997300456420478853310667723589999
Q gi|254780941|r 171 KGHGCDDVLNYLCSTLPLAPWVYSADQISDLPMFHFTAEITREKLFLHLHKEIPYSSCVVTEKWEEKKDGSILIRQVI 248 (311)
Q Consensus 171 ~g~Gid~L~~~L~~~lpe~~~~y~~~~~Td~~~~~~i~EiIREki~~~l~~EiPY~~~v~v~~~~~~~~~~~~I~~~I 248 (311)
T Consensus 346 tg~Gi~~L~~~I~~~L~~~~~~~--~l~--iP~~-------~g~l~a~l~~----~g~V~~e~y--~e~G~~~l~vrl 406 (426)
T PRK11058 346 TGAGIPLLFQALTERLSGEVAQH--TLR--LPPQ-------EGRLRSRFYQ----LQAIEKEWM--EEDGSVSLQVRM 406 (426)
T ss_pred CCCCHHHHHHHHHHHCCCCCEEE--EEE--ECHH-------HHHHHHHHHH----CCEEEEEEE--CCCCCEEEEEEE
T ss_conf 99899999999998703376899--999--7865-------2289999983----593899998--799809999997