HHsearch alignment for GI: 254780941 and conserved domain: PRK11537
>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=98.11 E-value=1.5e-05 Score=55.69 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=71.6
Q ss_pred EEEEECCCCCCHHHHHHHHHC----CCEEEECCCCC----------CEEEEE----EE-EEEE-----------------
Q ss_conf 899833899868899999868----92021058888----------602127----89-9973-----------------
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVG----AKVSIVTHKVQ----------TTRSIV----RG-IVSE----------------- 67 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g----~~vsivS~k~~----------TTr~~i----~g-i~~~----------------- 67 (311)
T Consensus 6 VtiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~iD~~li~~~~~~v~eL~nGCiCCs~~~dl~~~l~~l~~~~~ 85 (317)
T PRK11537 6 VTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLD 85 (317)
T ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 89983088889999999997277899789998376145332988735653268844773687305228999999998664
Q ss_pred -CC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCH--HHHHHHHHHCCCCCEEEEEECCC
Q ss_conf -99--48999987984010123575321002345555321001100001000000--01223454428720257872110
Q gi|254780941|r 68 -KE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNI--HDLLKEIAKRSSRLILILNKIDC 142 (311)
Q Consensus 68 -~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~--~~il~~l~~~~~p~IiVlNKiDl 142 (311)
T Consensus 86 ~~~~~~D~IiIEtsGlAdP~~I~~~~~~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~~~~~~~Qi~~AD---~illnK~Dl 162 (317)
T PRK11537 86 RGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYAD---RILLTKTDV 162 (317)
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHCC---EEEEECCCC
T ss_conf 35777547999625778839999998612565653203655999866555766530346676663186---899742002
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 1043457888864100123343110
Q gi|254780941|r 143 VKPERLLEQAEIANKLVFIEKTFMV 167 (311)
Q Consensus 143 v~~~~l~~~~~~~~~~~~~~~i~~I 167 (311)
T Consensus 163 v~~~~--~l~~~l~~lNp~A~i~~~ 185 (317)
T PRK11537 163 AGEAE--KLRERLARINARAPVYTV 185 (317)
T ss_pred CCHHH--HHHHHHHHHCCCCCEEEE
T ss_conf 36599--999999986899848996