HHsearch alignment for GI: 254780941 and conserved domain: TIGR00101
>TIGR00101 ureG urease accessory protein UreG; InterPro: IPR004400 This is a GTP hydrolase for assembly of the nickel metallocentre of urease. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. They play a central role in nitrogen metabolism.; GO: 0005524 ATP binding, 0016151 nickel ion binding.
Probab=97.61 E-value=0.00039 Score=46.61 Aligned_cols=150 Identities=21% Similarity=0.313 Sum_probs=82.6
Q ss_pred EEEEECCCCCCHHHHHHHHHCC-----CEEEECCCCC-------------CEEEEEEEEEEE------------------
Q ss_conf 8998338998688999998689-----2021058888-------------602127899973------------------
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGA-----KVSIVTHKVQ-------------TTRSIVRGIVSE------------------ 67 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~-----~vsivS~k~~-------------TTr~~i~gi~~~------------------ 67 (311)
T Consensus 3 ~iG~~GPvG~Gktal~e~l~~~~~~~y~~av~tndiyt~eda~fl~~~~~l~~~ri~GvetGGCPhtairedas~nl~a~ 82 (199)
T TIGR00101 3 KIGVAGPVGSGKTALIEALTRELAKKYDLAVITNDIYTQEDAEFLVKNSVLPPERILGVETGGCPHTAIREDASLNLEAV 82 (199)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 66650477764689999999988740667787311001246888876412662226774158987300100021218899
Q ss_pred -------CCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf -------9948999987984010123575321002345555321001100001000000012234544287202578721
Q gi|254780941|r 68 -------KESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKI 140 (311)
Q Consensus 68 -------~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKi 140 (311)
T Consensus 83 ~~~~~rf~~~~~~~~esGG-----dnl~atf------~P~l~d~t~~vidva~G~ki-PrkGGPGit---~sdllvink~ 147 (199)
T TIGR00101 83 EELEARFPDLELVFIESGG-----DNLSATF------SPELADLTIFVIDVAEGDKI-PRKGGPGIT---RSDLLVINKI 147 (199)
T ss_pred HHHHHCCCCEEEEEEECCC-----CCCEEEC------CCCEEEEEEEEEEECCCCCC-CCCCCCCCC---CHHEEEEECC
T ss_conf 9886215640489983288-----6200002------76402367889972058745-677889853---0012243200
Q ss_pred CCHHHHH-HHHHHH-HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 1010434-578888-64100123343110001387426789999983662
Q gi|254780941|r 141 DCVKPER-LLEQAE-IANKLVFIEKTFMVSATKGHGCDDVLNYLCSTLPL 188 (311)
Q Consensus 141 Dlv~~~~-l~~~~~-~~~~~~~~~~i~~ISAk~g~Gid~L~~~L~~~lpe 188 (311)
T Consensus 148 dlaP~vGadl~~m~rd~~~mr~~~Pf~ftn~~~~~~l~~v~~~~~~~~~~ 197 (199)
T TIGR00101 148 DLAPFVGADLKVMERDAKKMRGEKPFIFTNLKKKEGLDDVIDFIEKYALL 197 (199)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHC
T ss_conf 12531123035443567864069974664003320367999999875320