HHsearch alignment for GI: 254780941 and conserved domain: TIGR00991
>TIGR00991 3a0901s02IAP34 GTP-binding protein; InterPro: IPR005688 Two integral outer envelope GTPases, Toc34 and Toc86, are proposed to regulate the recognition and translocation of nuclear-encoded preproteins during the early stages of protein import into chloroplasts.. The cytosolic region of Toc34 reveals 34% alpha-helical and 260eta-strand structure and is stabilized by intramolecular electrostatic interaction. Toc34 binds both chloroplast preproteins and isolated transit peptides in a guanosine triphosphate- (GTP-) dependent mechanism . ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0009707 chloroplast outer membrane.
Probab=98.45 E-value=3e-07 Score=66.74 Aligned_cols=130 Identities=18% Similarity=0.271 Sum_probs=82.6
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCH
Q ss_conf 24368512189983389986889999986892021058888602127899973994899998798401012357532100
Q gi|254780941|r 15 FVQDNSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRL 94 (311)
Q Consensus 15 ~~~~~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~ 94 (311)
T Consensus 32 ~k~edv~~lt~lvmGkGGvGksstvn~~~Ge~~~~~s~fqseG~rP~~~sr~r~GftlniidtPGlieGGy-~n~~a~~i 110 (328)
T TIGR00991 32 LKEEDVSSLTILVMGKGGVGKSSTVNSIIGERVAAVSAFQSEGLRPVLVSRTRAGFTLNIIDTPGLIEGGY-INDQAVNI 110 (328)
T ss_pred HHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC-HHHHHHHH
T ss_conf 21210033678886068766310122333202320000002588632665124661577532786101530-33789999
Q ss_pred HHHHH--HHHHHHCCCC--HHHHHHHCCHHHHHHHHHHC-----CCCCEEEEEECCCHHHH
Q ss_conf 23455--5532100110--00010000000122345442-----87202578721101043
Q gi|254780941|r 95 SWSTI--KHADIVCLVV--DSHRELKVNIHDLLKEIAKR-----SSRLILILNKIDCVKPE 146 (311)
Q Consensus 95 ~~~~l--~~aDiil~Vv--Da~~~~~~~~~~il~~l~~~-----~~p~IiVlNKiDlv~~~ 146 (311)
T Consensus 111 ik~fll~~tidvllyvdrld~yr-~d~ld~~v~~ait~~fGk~iW~~~~~~lthaq~sPPd 170 (328)
T TIGR00991 111 IKRFLLDKTIDVLLYVDRLDAYR-VDDLDKQVVKAITDSFGKEIWKKSLVVLTHAQLSPPD 170 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99988531212210012332354-5468899999998764277887788876531058888