HHsearch alignment for GI: 254780941 and conserved domain: TIGR01394

>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=99.69  E-value=7e-17  Score=129.07  Aligned_cols=155  Identities=20%  Similarity=0.241  Sum_probs=113.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCEEEECCC-CCCEEEEE--------------E---EEEEECC----EEEEEEECCCCH
Q ss_conf             899833899868899999868920210588-88602127--------------8---9997399----489999879840
Q gi|254780941|r   24 CVALVGATNAGKSTLVNRFVGAKVSIVTHK-VQTTRSIV--------------R---GIVSEKE----SQIVFLDTPGIF   81 (311)
Q Consensus        24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k-~~TTr~~i--------------~---gi~~~~~----~qiifvDTPG~~   81 (311)
T Consensus         3 NIAIIAHVDHGKTTLVD~LL~Qsgf-~f~~~~~~~~ER~MDSNDLErERGITILaKNTav~y~g~dG~~~INIvDTPG--   79 (609)
T TIGR01394         3 NIAIIAHVDHGKTTLVDALLKQSGF-TFRADNEAVAERVMDSNDLERERGITILAKNTAVRYNGKDGVTKINIVDTPG--   79 (609)
T ss_pred             CEEEEEEECCCCHHHHHHHHHHHHH-HHHHCCCCCEEEEECCCCCCHHCCCCCCCEEEEEEECCCCCEEEEEEEECCC--
T ss_conf             1899988069943689888887658-8641588321354067652100155201300366252889718997781689--


Q ss_pred             HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHH--HHHHHHHHHHH----
Q ss_conf             101235753210023455553210011000010000000122345442872025787211010--43457888864----
Q gi|254780941|r   82 NAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVK--PERLLEQAEIA----  155 (311)
Q Consensus        82 ~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~--~~~l~~~~~~~----  155 (311)
T Consensus        80 ------HADFGGEVERvL~MVDGvlLlVDA~EGPMPQTrFVL~KAL~~gLkPIVViNKiDrp~ARP~eV~d~vFDLF~~L  153 (609)
T TIGR01394        80 ------HADFGGEVERVLGMVDGVLLLVDASEGPMPQTRFVLKKALELGLKPIVVINKIDRPSARPDEVVDEVFDLFIEL  153 (609)
T ss_pred             ------CCCCCCEEEEECEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             ------88788658873302405899985788898853478999995689369997134788788378875787888853


Q ss_pred             ---HHCCCCCCCCCCCCCCC---------------CCHHHHHHHHHHHCCC
Q ss_conf             ---10012334311000138---------------7426789999983662
Q gi|254780941|r  156 ---NKLVFIEKTFMVSATKG---------------HGCDDVLNYLCSTLPL  188 (311)
Q Consensus       156 ---~~~~~~~~i~~ISAk~g---------------~Gid~L~~~L~~~lpe  188 (311)
T Consensus       154 gA~deQLDF-P~vYASa~~G~A~l~~~~dg~~~~~~~m~PLFd~I~~hvPa  203 (609)
T TIGR01394       154 GADDEQLDF-PIVYASARAGWASLDKDKDGLDDDSEDMAPLFDAILRHVPA  203 (609)
T ss_pred             CCCCCCCCH-HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             888001012-56766523672014466577887220178999898640688