HHsearch alignment for GI: 254780941 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=100.00 E-value=1.6e-39 Score=275.59 Aligned_cols=205 Identities=25% Similarity=0.301 Sum_probs=163.4
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89983389986889999986892021058888602127899973994899998798401012357532100234555532
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHAD 103 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aD 103 (311)
T Consensus 1 ~VaIvGrpNVGKStLfN~L~~~~~aIv~~~~G~TRD~~~~~~~~~~~~~~liDT~G~~~~~~~~~~~~~~q~~~ai~~aD 80 (429)
T TIGR03594 1 VVAIVGRPNVGKSTLFNRLTGKRDAIVADTPGVTRDRKYGDAEWGGREFILIDTGGIEEDDDGLDKQIREQAEIAIEEAD 80 (429)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98999999987899999987886176159899887733799999990799998989898743789999999999998679
Q ss_pred HHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 10011000010000000122345442872025787211010434578888641001233431100013874267899999
Q gi|254780941|r 104 IVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSATKGHGCDDVLNYLC 183 (311)
Q Consensus 104 iil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid~L~~~L~ 183 (311)
T Consensus 81 lIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~~~~~~--~~ef~--~LG~~~~i~iSA~h~~Gi~~L~~~i~ 156 (429)
T TIGR03594 81 VILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGKKEDAV--AAEFY--SLGFGEPIPISAEHGRGIGDLLDAIL 156 (429)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH--HHHHH--HHCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf 999998577689867999999998719978999983467531456--99999--83689868874204679999999999
Q ss_pred HHCCCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
Q ss_conf 836622356896433---------430256789987599999973004564204788533
Q gi|254780941|r 184 STLPLAPWVYSADQI---------SDLPMFHFTAEITREKLFLHLHKEIPYSSCVVTEKW 234 (311)
Q Consensus 184 ~~lpe~~~~y~~~~~---------Td~~~~~~i~EiIREki~~~l~~EiPY~~~v~v~~~ 234 (311)
T Consensus 157 ~~l~~~~~~~~~~~~~iriaivGrPNvGKSTl~N~ll~~~r--~ivs~~~GtTrD~i~~~ 214 (429)
T TIGR03594 157 ELLPEEEEEEEEEDGPIKIAIIGRPNVGKSTLVNALLGEER--VIVSDIAGTTRDSIDIP 214 (429)
T ss_pred HHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH--HHCCCCCCCCCCCEEEE
T ss_conf 65886655543455652699974887654677777654333--21479998631026879