HHsearch alignment for GI: 254780941 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=100.00 E-value=1.2e-36 Score=256.99 Aligned_cols=171 Identities=25% Similarity=0.328 Sum_probs=144.1
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCC---CCCCCCCCHH
Q ss_conf 8512189983389986889999986892021058888602127899973994899998798401012---3575321002
Q gi|254780941|r 19 NSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKD---SYHKLMIRLS 95 (311)
Q Consensus 19 ~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~---~l~~~~~~~~ 95 (311)
T Consensus 169 ~~~~iriaivGrPNvGKSTl~N~ll~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~~iDTaGirkk~k~~~~~e~~s~~~t 248 (429)
T TIGR03594 169 EDGPIKIAIIGRPNVGKSTLVNALLGEERVIVSDIAGTTRDSIDIPFERNGKKYLLIDTAGIRRKGKVTEGIEKYSVLRT 248 (429)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 55652699974887654677777654333214799986310268799999908999989887636642304779999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH----HHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 34555532100110000100000001223454428720257872110104345----78888641001233431100013
Q gi|254780941|r 96 WSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERL----LEQAEIANKLVFIEKTFMVSATK 171 (311)
Q Consensus 96 ~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l----~~~~~~~~~~~~~~~i~~ISAk~ 171 (311)
T Consensus 249 ~~~i~~~dvvil~iD~~~~~~~qD~~i~~~i~~~~k~~ii~~NK~Dli~~~~~~~~~~~~i~~~l~~~~~~pI~fiSA~~ 328 (429)
T TIGR03594 249 LKAIERADVVLLVLDATEGITEQDLRIAGLALEAGKALIIVVNKWDLVKDEKTREEFKKELRRKLPFLDFAPIVFISALT 328 (429)
T ss_pred HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 99987447799999766588488899999898739976999972230379999999999999856236898689973457
Q ss_pred CCCHHHHHHHHHHHCCCC
Q ss_conf 874267899999836622
Q gi|254780941|r 172 GHGCDDVLNYLCSTLPLA 189 (311)
Q Consensus 172 g~Gid~L~~~L~~~lpe~ 189 (311)
T Consensus 329 g~gi~kl~~~i~~~~~~~ 346 (429)
T TIGR03594 329 GQGVDKLLDAIDEVYENA 346 (429)
T ss_pred CCCHHHHHHHHHHHHHHH
T ss_conf 789999999999999997