HHsearch alignment for GI: 254780941 and conserved domain: TIGR03597
>TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH. This family describes YqeH, a member of a larger family of GTPases involved in ribosome biogenesis. Like YqlF, it shows a cyclical permutation relative to GTPases EngA (in which the GTPase domain is duplicated), Era, and others. Members of this protein family are found in a relatively small number of bacterial species, including Bacillus subtilis but not Escherichia coli.
Probab=98.34 E-value=4.9e-07 Score=65.39 Aligned_cols=84 Identities=24% Similarity=0.290 Sum_probs=59.1
Q ss_pred HHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHH----HHHHHHHHHHH--CCCCCCCCCCCCCCCC
Q ss_conf 55321001100001000000012234544287202578721101043----45788886410--0123343110001387
Q gi|254780941|r 100 KHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPE----RLLEQAEIANK--LVFIEKTFMVSATKGH 173 (311)
Q Consensus 100 ~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~----~l~~~~~~~~~--~~~~~~i~~ISAk~g~ 173 (311)
T Consensus 62 ~~~~lVv~VvDi~Df~gS~~~~l~~~~~--~~~v~lV~NK~DLLP~~~~~~~i~~wv~~~~~~~gl~~~~V~lvSa~~g~ 139 (360)
T TIGR03597 62 DSNALIVYVVDIFDFEGSLIPELKRFVG--GNPVLLVGNKIDLLPKSVNLSKIKEWMKKRAKELGLKPVDIILVSAKKGN 139 (360)
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHC--CCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf 3683799998641477653464999838--98589999805428876787999999999999859983668999688898
Q ss_pred CHHHHHHHHHHH
Q ss_conf 426789999983
Q gi|254780941|r 174 GCDDVLNYLCST 185 (311)
Q Consensus 174 Gid~L~~~L~~~ 185 (311)
T Consensus 140 gi~~l~~~i~~~ 151 (360)
T TIGR03597 140 GIDELLDKIKKA 151 (360)
T ss_pred CHHHHHHHHHHH
T ss_conf 999999999987