HHsearch alignment for GI: 254780941 and conserved domain: cd01849
>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=98.81 E-value=5.2e-09 Score=78.14 Aligned_cols=85 Identities=26% Similarity=0.312 Sum_probs=68.8
Q ss_pred HHHCCCCHHHHHHHCCHHHHHHHHHHC-CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 210011000010000000122345442-8720257872110104345788886410012334311000138742678999
Q gi|254780941|r 103 DIVCLVVDSHRELKVNIHDLLKEIAKR-SSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSATKGHGCDDVLNY 181 (311)
Q Consensus 103 Diil~VvDa~~~~~~~~~~il~~l~~~-~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid~L~~~ 181 (311)
T Consensus 1 D~il~VvDaR~pl~~~~~~~~~~l~~~~~K~~ilvlNK~Dl~~~~~~~~w~~~~~~~~-~~~~~~~S~~~~~~~~~~~~~ 79 (155)
T cd01849 1 DVILEVLDARDPLGTRSPDIERVLIKEKGKKLILVLNKADLVPKEVLRKWLAYLRHSY-PTIPFKISATNGQGIEKKESA 79 (155)
T ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCEEEHHHCCCCCHHHHHHH
T ss_conf 9899999687999988999999998658994899976734589899999999999629-985167110267456889999
Q ss_pred HHHHCCC
Q ss_conf 9983662
Q gi|254780941|r 182 LCSTLPL 188 (311)
Q Consensus 182 L~~~lpe 188 (311)
T Consensus 80 ~~~~~~~ 86 (155)
T cd01849 80 FTKQTNS 86 (155)
T ss_pred HHHHHHH
T ss_conf 9987156