HHsearch alignment for GI: 254780941 and conserved domain: cd01855
>cd01855 YqeH YqeH. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Probab=99.32 E-value=2.3e-12 Score=99.82 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=69.2
Q ss_pred HHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH----HHHHHHH---HHCCCCCCCCCCCCCCCCC
Q ss_conf 32100110000100000001223454428720257872110104345----7888864---1001233431100013874
Q gi|254780941|r 102 ADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERL----LEQAEIA---NKLVFIEKTFMVSATKGHG 174 (311)
Q Consensus 102 aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l----~~~~~~~---~~~~~~~~i~~ISAk~g~G 174 (311)
T Consensus 35 ~~lVv~VvDi~Df~~S~~~~l~~~~--~~~~v~lV~NK~DLLp~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvSa~~~~g 112 (190)
T cd01855 35 KALVVHVVDIFDFPGSLIPRLRLFG--GNNPVILVGNKIDLLPKDKNLVRIKNWLRAKAAAGLGLKPKDVILISAKKGWG 112 (190)
T ss_pred CCEEEEEEECCCCCCCCCHHHHHHC--CCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 8459999754357644465579861--79868999981551788765888898999997501599843179976657869
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 26789999983662235689643343025678998759
Q gi|254780941|r 175 CDDVLNYLCSTLPLAPWVYSADQISDLPMFHFTAEITR 212 (311)
Q Consensus 175 id~L~~~L~~~lpe~~~~y~~~~~Td~~~~~~i~EiIR 212 (311)
T Consensus 113 i~~L~~~i~~~~~~~~~vyvvG~-~NvGKSTLiN~Ll~ 149 (190)
T cd01855 113 VEELINAIKKLAKKGGDVYVVGA-TNVGKSTLINALLK 149 (190)
T ss_pred HHHHHHHHHHHHCCCCCEEEECC-CCCCHHHHHHHHHH
T ss_conf 89999999997466985799805-87546799999863