HHsearch alignment for GI: 254780941 and conserved domain: cd01855
>cd01855 YqeH YqeH. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Probab=98.49 E-value=1.2e-07 Score=69.28 Aligned_cols=55 Identities=36% Similarity=0.436 Sum_probs=43.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHCCC--------EEEECCCCCCEEEEEEEEEEECCEEEEEEECCCC
Q ss_conf 189983389986889999986892--------0210588886021278999739948999987984
Q gi|254780941|r 23 GCVALVGATNAGKSTLVNRFVGAK--------VSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGI 80 (311)
Q Consensus 23 g~VaivG~pN~GKSTL~N~l~g~~--------vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~ 80 (311)
T Consensus 128 ~~vyvvG~~NvGKSTLiN~Ll~~~~~~~~~~~~~t~S~~PGTTl~~i~~~--l~~-~~~l~DtPGi 190 (190)
T cd01855 128 GDVYVVGATNVGKSTLINALLKKDNGKKKLKDLLTTSPIPGTTLDLIKIP--LGN-GKKLYDTPGI 190 (190)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEE--CCC-CCEEEECCCC
T ss_conf 85799805875467999998630234434566406679997316525897--399-9999959599