HHsearch alignment for GI: 254780941 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=99.89 E-value=1.1e-22 Score=166.58 Aligned_cols=156 Identities=21% Similarity=0.258 Sum_probs=113.3
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCC--------------CCEEEEEEEE--EE---ECCEEEEEEECCCCHHHC
Q ss_conf 8998338998688999998689202105888--------------8602127899--97---399489999879840101
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKV--------------QTTRSIVRGI--VS---EKESQIVFLDTPGIFNAK 84 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~--------------~TTr~~i~gi--~~---~~~~qiifvDTPG~~~~~ 84 (311)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh---- 77 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGH---- 77 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCC----
T ss_conf 5999948998989999999998599541457324416517678638668743368884136787148999989986----
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHH--HHHHHHHHHHHHCCCCC
Q ss_conf 2357532100234555532100110000100000001223454428720257872110104--34578888641001233
Q gi|254780941|r 85 DSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKP--ERLLEQAEIANKLVFIE 162 (311)
Q Consensus 85 ~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~--~~l~~~~~~~~~~~~~~ 162 (311)
T Consensus 78 ----~dF~~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~~~v~~~i~~~~g-~~~~ 152 (179)
T cd01890 78 ----VDFSYEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADPERVKQQIEDVLG-LDPS 152 (179)
T ss_pred ----CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC-CCCC
T ss_conf ----45177898899754427899864778737489999999876998899986555677899999999999868-8976
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 43110001387426789999983662
Q gi|254780941|r 163 KTFMVSATKGHGCDDVLNYLCSTLPL 188 (311)
Q Consensus 163 ~i~~ISAk~g~Gid~L~~~L~~~lpe 188 (311)
T Consensus 153 ~~v~vSA~~g~gv~~Ll~~i~~~ip~ 178 (179)
T cd01890 153 EAILVSAKTGLGVEDLLEAIVERIPP 178 (179)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 74884378897989999999964889