HHsearch alignment for GI: 254780941 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=98.18 E-value=3.1e-06 Score=60.19 Aligned_cols=102 Identities=19% Similarity=0.230 Sum_probs=55.4
Q ss_pred EEEECCCCCCHHHHHHHHHC------CCEEEE-----CCCCC------CEEE------EEEEEE----------------
Q ss_conf 99833899868899999868------920210-----58888------6021------278999----------------
Q gi|254780941|r 25 VALVGATNAGKSTLVNRFVG------AKVSIV-----THKVQ------TTRS------IVRGIV---------------- 65 (311)
Q Consensus 25 VaivG~pN~GKSTL~N~l~g------~~vsiv-----S~k~~------TTr~------~i~gi~---------------- 65 (311)
T Consensus 2 iGitG~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ggla~~~~ 81 (148)
T cd03114 2 IGITGVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFLGGLSRATP 81 (148)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 76258997878999999999999789837999968887866862032354534415799836863466665420468899
Q ss_pred ------EECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf ------73994899998798401012357532100234555532100110000100000001223454428720257872
Q gi|254780941|r 66 ------SEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNK 139 (311)
Q Consensus 66 ------~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNK 139 (311)
T Consensus 82 ~~i~~l~~~g~D~IiIETvGvGQ-----------se~~i~~~aD~~i~v~~p~~GD~iQ---~-~K~gi~e~aDl~vvNK 146 (148)
T cd03114 82 EVIRVLDAAGFDVIIVETVGVGQ-----------SEVDIASMADTTVVVMAPGAGDDIQ---A-IKAGIMEIADIVVVNK 146 (148)
T ss_pred HHHHHHHHCCCCEEEEECCCCCC-----------CHHHHHHHCCEEEEEECCCCCCHHH---H-CCCCHHHCCCEEEEEC
T ss_conf 99999997599989997487775-----------6026554356699996368873776---1-1228521246999937
Q ss_pred CC
Q ss_conf 11
Q gi|254780941|r 140 ID 141 (311)
Q Consensus 140 iD 141 (311)
T Consensus 147 ~D 148 (148)
T cd03114 147 AD 148 (148)
T ss_pred CC
T ss_conf 89