>cd04108 Rab36_Rab34 Rab34/Rab36 subfamily. Rab34, found primarily in the Golgi, interacts with its effector, Rab-interacting lysosomal protein (RILP). This enables its participation in microtubular dynenin-dynactin-mediated repositioning of lysosomes from the cell periphery to the Golgi. A Rab34 (Rah) isoform that lacks the consensus GTP-binding region has been identified in mice. This isoform is associated with membrane ruffles and promotes macropinosome formation. Rab36 has been mapped to human chromosome 22q11.2, a region that is homozygously deleted in malignant rhabdoid tumors (MRTs). However, experimental assessments do not implicate Rab36 as a tumor suppressor that would enable tumor formation through a loss-of-function mechanism. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further re

Probab=99.65 E-value=8.9e-16 Score=121.94 Aligned_cols=154 Identities=18% Similarity=0.172 Sum_probs=96.8 Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEE-EEEEEEEEEC--CEEEEEEECCCCHHHCCCCCCCCCCHHHHHHH Q ss_conf 89983389986889999986892021058888602-1278999739--94899998798401012357532100234555 Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTR-SIVRGIVSEK--ESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100 (311) Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr-~~i~gi~~~~--~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~ 100 (311) T Consensus 2 KivlvGd~~VGKTsli~r~~~~~f~--~~y~~Tig~d~~~k~~~v~~~~~~l~iwDtaGq--------e~f~~l~~~y~r 71 (170) T cd04108 2 KVIVVGDLSVGKTCLINRFCKDVFD--KNYKATIGVDFEMERFEILGVPFSLQLWDTAGQ--------ERFKCIASTYYR 71 (170) T ss_pred EEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCEEEEEEEEEECCEEEEEEEEECCCC--------CCCCCCHHHHHC T ss_conf 8999998998989999999639889--972563450589999999999999999989999--------746644377732 Q ss_pred HHHHHCCCCHHHHHHHCC-HHHHHHHH-H---HCCCCCEEEEEECCCHHHHHH---HHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 532100110000100000-00122345-4---428720257872110104345---788886410012334311000138 Q gi|254780941|r 101 HADIVCLVVDSHRELKVN-IHDLLKEI-A---KRSSRLILILNKIDCVKPERL---LEQAEIANKLVFIEKTFMVSATKG 172 (311) Q Consensus 101 ~aDiil~VvDa~~~~~~~-~~~il~~l-~---~~~~p~IiVlNKiDlv~~~~l---~~~~~~~~~~~~~~~i~~ISAk~g 172 (311) T Consensus 72 ~a~~~ilvyDvt~~~Sf~~~~~w~~~~~~~~~~~~~~i~LvgNK~DL~~~~~~~~~~~~~~~~a~~~~-~~~~E~SAk~g 150 (170) T cd04108 72 GAQAIIIVFDLTDVASLEHTRQWLEDALKENDPSSVLLFLVGTKKDLSSPAQYALMEQDAIKLAAEMQ-AEYWSVSALSG 150 (170) T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHCC-CEEEEECCCCC T ss_conf 78758999978987899999999999998508999829999984137987557644899999998779-87999855788 Q ss_pred CCHHHHHHHHHHHCCC Q ss_conf 7426789999983662 Q gi|254780941|r 173 HGCDDVLNYLCSTLPL 188 (311) Q Consensus 173 ~Gid~L~~~L~~~lpe 188 (311) T Consensus 151 ~nV~e~F~~ia~~~~e 166 (170) T cd04108 151 ENVREFFFRVAALTFE 166 (170) T ss_pred CCHHHHHHHHHHHHHH T ss_conf 1879999999999986

HHsearch alignment for GI: 254780941 and conserved domain: cd04108