HHsearch alignment for GI: 254780941 and conserved domain: cd04138
>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=99.65 E-value=3.3e-15 Score=118.22 Aligned_cols=151 Identities=19% Similarity=0.163 Sum_probs=97.9
Q ss_pred EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 998338998688999998689202105888860212789997399--489999879840101235753210023455553
Q gi|254780941|r 25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHA 102 (311)
Q Consensus 25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~a 102 (311)
T Consensus 4 vvlvGd~~VGKTsli~r~~~~~F~~-~y~~-Ti~~~~~k~~~i~~~~~~l~iwDtaG~e--------~~~~l~~~~~~~a 73 (162)
T cd04138 4 LVVVGAGGVGKSALTIQLIQNHFVD-EYDP-TIEDSYRKQVVIDGETCLLDILDTAGQE--------EYSAMRDQYMRTG 73 (162)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCC-CCCC-CCCCEEEEEEEECCEEEEEEEEECCCCC--------CCCHHHHHHHCCC
T ss_conf 9998999988999999998392887-5688-5552799999999999999999799860--------1114789871578
Q ss_pred HHHCCCCHHHHHHHCC-HHHHHHHHH----HCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 2100110000100000-001223454----42872025787211010434578888641001233431100013874267
Q gi|254780941|r 103 DIVCLVVDSHRELKVN-IHDLLKEIA----KRSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSATKGHGCDD 177 (311)
Q Consensus 103 Diil~VvDa~~~~~~~-~~~il~~l~----~~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid~ 177 (311)
T Consensus 74 ~~~ilvydvt~~~Sf~~v~~w~~~i~~~~~~~~~piilVgNK~Dl~~r~V~~~e~~~~a~~~~~-~f~E~SAk~~~nV~e 152 (162)
T cd04138 74 EGFLCVFAINSRKSFEDIHTYREQIKRVKDSDDVPMVLVGNKCDLAARTVSSRQGQDLAKSYGI-PYIETSAKTRQGVEE 152 (162)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHCCC-EEEEECCCCCCCHHH
T ss_conf 7799996179889999899999999985488885499997653564555889999999998099-899973899859899
Q ss_pred HHHHHHHHC
Q ss_conf 899999836
Q gi|254780941|r 178 VLNYLCSTL 186 (311)
Q Consensus 178 L~~~L~~~l 186 (311)
T Consensus 153 ~F~~l~~~I 161 (162)
T cd04138 153 AFYTLVREI 161 (162)
T ss_pred HHHHHHHHC
T ss_conf 999999963