HHsearch alignment for GI: 254780941 and conserved domain: cd04144

>cd04144 Ras2 Ras2 subfamily. The Ras2 subfamily, found exclusively in fungi, was first identified in Ustilago maydis. In U. maydis, Ras2 is regulated by Sql2, a protein that is homologous to GEFs (guanine nucleotide exchange factors) of the CDC25 family. Ras2 has been shown to induce filamentous growth, but the signaling cascade through which Ras2 and Sql2 regulate cell morphology is not known. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins.
Probab=99.60  E-value=1.4e-14  Score=114.12  Aligned_cols=154  Identities=17%  Similarity=0.142  Sum_probs=98.6

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             998338998688999998689202105888860212789997399--489999879840101235753210023455553
Q gi|254780941|r   25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHA  102 (311)
Q Consensus        25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~a  102 (311)
T Consensus         2 ivviGd~gVGKTsli~r~~~~~F~~-~y~p-Ti~~~~~k~~~~~~~~~~l~iwDtaG~--------e~~~~l~~~~~r~a   71 (190)
T cd04144           2 LVVLGDGGVGKTALTIQLCLNHFVE-TYDP-TIEDSYRKQVVVDGQPCMLEVLDTAGQ--------EEYTALRDQWIREG   71 (190)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCC-CCCC-CCCEEEEEEEEECCEEEEEEEEECCCC--------CCHHHHHHHHHCCC
T ss_conf             8999989987899999996297998-8699-724788999999999999999989997--------31167889982367


Q ss_pred             HHHCCCCHHHHHHHCCH-HHHHHHHH------HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             21001100001000000-01223454------428720257872110104345-78888641001233431100013874
Q gi|254780941|r  103 DIVCLVVDSHRELKVNI-HDLLKEIA------KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATKGHG  174 (311)
Q Consensus       103 Diil~VvDa~~~~~~~~-~~il~~l~------~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~g~G  174 (311)
T Consensus        72 ~~~ilVydvtd~~SF~~l~~w~~~i~~~~~~~~~~~piiLVGNK~Dl~~~r~V~~~e~~~~a~~~~~-~~~E~SAk~~~n  150 (190)
T cd04144          72 EGFILVYSITSRSTFERVERFREQIQRVKDESAADVPIMIVGNKCDKVYEREVSTEEGAALARRLGC-EFIEASAKTNVN  150 (190)
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHCCC-EEEEECCCCCCC
T ss_conf             6589997279778999999999999998533799952895145535033057899999999998099-899973588809


Q ss_pred             HHHHHHHHHHHCCCC
Q ss_conf             267899999836622
Q gi|254780941|r  175 CDDVLNYLCSTLPLA  189 (311)
Q Consensus       175 id~L~~~L~~~lpe~  189 (311)
T Consensus       151 V~e~F~~l~~~i~~~  165 (190)
T cd04144         151 VERAFYTLVRALRQQ  165 (190)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             799999999999987