HHsearch alignment for GI: 254780941 and conserved domain: cd04144
>cd04144 Ras2 Ras2 subfamily. The Ras2 subfamily, found exclusively in fungi, was first identified in Ustilago maydis. In U. maydis, Ras2 is regulated by Sql2, a protein that is homologous to GEFs (guanine nucleotide exchange factors) of the CDC25 family. Ras2 has been shown to induce filamentous growth, but the signaling cascade through which Ras2 and Sql2 regulate cell morphology is not known. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins.
Probab=99.60 E-value=1.4e-14 Score=114.12 Aligned_cols=154 Identities=17% Similarity=0.142 Sum_probs=98.6
Q ss_pred EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 998338998688999998689202105888860212789997399--489999879840101235753210023455553
Q gi|254780941|r 25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHA 102 (311)
Q Consensus 25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~a 102 (311)
T Consensus 2 ivviGd~gVGKTsli~r~~~~~F~~-~y~p-Ti~~~~~k~~~~~~~~~~l~iwDtaG~--------e~~~~l~~~~~r~a 71 (190)
T cd04144 2 LVVLGDGGVGKTALTIQLCLNHFVE-TYDP-TIEDSYRKQVVVDGQPCMLEVLDTAGQ--------EEYTALRDQWIREG 71 (190)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCC-CCCC-CCCEEEEEEEEECCEEEEEEEEECCCC--------CCHHHHHHHHHCCC
T ss_conf 8999989987899999996297998-8699-724788999999999999999989997--------31167889982367
Q ss_pred HHHCCCCHHHHHHHCCH-HHHHHHHH------HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 21001100001000000-01223454------428720257872110104345-78888641001233431100013874
Q gi|254780941|r 103 DIVCLVVDSHRELKVNI-HDLLKEIA------KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATKGHG 174 (311)
Q Consensus 103 Diil~VvDa~~~~~~~~-~~il~~l~------~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~g~G 174 (311)
T Consensus 72 ~~~ilVydvtd~~SF~~l~~w~~~i~~~~~~~~~~~piiLVGNK~Dl~~~r~V~~~e~~~~a~~~~~-~~~E~SAk~~~n 150 (190)
T cd04144 72 EGFILVYSITSRSTFERVERFREQIQRVKDESAADVPIMIVGNKCDKVYEREVSTEEGAALARRLGC-EFIEASAKTNVN 150 (190)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHCCC-EEEEECCCCCCC
T ss_conf 6589997279778999999999999998533799952895145535033057899999999998099-899973588809
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 267899999836622
Q gi|254780941|r 175 CDDVLNYLCSTLPLA 189 (311)
Q Consensus 175 id~L~~~L~~~lpe~ 189 (311)
T Consensus 151 V~e~F~~l~~~i~~~ 165 (190)
T cd04144 151 VERAFYTLVRALRQQ 165 (190)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 799999999999987