HHsearch alignment for GI: 254780941 and conserved domain: cd04145

>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.65  E-value=3.2e-15  Score=118.36  Aligned_cols=152  Identities=18%  Similarity=0.181  Sum_probs=98.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             8998338998688999998689202105888860212789997399--48999987984010123575321002345555
Q gi|254780941|r   24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKH  101 (311)
Q Consensus        24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~  101 (311)
T Consensus         4 Kiv~lGd~~VGKTsli~r~~~~~f~--~~y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG~e--------~~~~~~~~~~~~   73 (164)
T cd04145           4 KLVVVGGGGVGKSALTIQFIQSYFV--TDYDPTIEDSYTKQCEIDGQWAILDILDTAGQE--------EFSAMREQYMRT   73 (164)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCEEEEEEEEEEECCEEEEEEEEECCCCC--------CCCHHHHHHHCC
T ss_conf             9999999997889999999809898--756784135899999999999999999898860--------312567987346


Q ss_pred             HHHHCCCCHHHHHHHCC-HHHHHHHHH----HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf             32100110000100000-001223454----428720257872110104345-788886410012334311000138742
Q gi|254780941|r  102 ADIVCLVVDSHRELKVN-IHDLLKEIA----KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATKGHGC  175 (311)
Q Consensus       102 aDiil~VvDa~~~~~~~-~~~il~~l~----~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~g~Gi  175 (311)
T Consensus        74 a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL~~~r~Vs~~e~~~~a~~~~~-~~~E~SAk~~~nV  152 (164)
T cd04145          74 GEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADLEHQRKVSREEGQELARKLKI-PYIETSAKDRLNV  152 (164)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHCCC-EEEEECCCCCCCH
T ss_conf             787468985673543999999999999861887775265303457354088999999999998199-8999854868277


Q ss_pred             HHHHHHHHHHC
Q ss_conf             67899999836
Q gi|254780941|r  176 DDVLNYLCSTL  186 (311)
Q Consensus       176 d~L~~~L~~~l  186 (311)
T Consensus       153 ~e~F~~l~~~I  163 (164)
T cd04145         153 DKAFHDLVRVI  163 (164)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999975