HHsearch alignment for GI: 254780941 and conserved domain: cd04151

>cd04151 Arl1 Arl1 subfamily. Arl1 (Arf-like 1) localizes to the Golgi complex, where it is believed to recruit effector proteins to the trans-Golgi network. Like most members of the Arf family, Arl1 is myristoylated at its N-terminal helix and mutation of the myristoylation site disrupts Golgi targeting. In humans, the Golgi-localized proteins golgin-97 and golgin-245 have been identified as Arl1 effectors. Golgins are large coiled-coil proteins found in the Golgi, and these golgins contain a C-terminal GRIP domain, which is the site of Arl1 binding. Additional Arl1 effectors include the GARP (Golgi-associated retrograde protein)/VFT (Vps53) vesicle-tethering complex and Arfaptin 2. Arl1 is not required for exocytosis, but appears necessary for trafficking from the endosomes to the Golgi. In Drosophila zygotes, mutation of Arl1 is lethal, and in the host-bloodstream form of Trypanosoma brucei, Arl1 is essential for viability.
Probab=99.75  E-value=1.8e-17  Score=132.89  Aligned_cols=148  Identities=23%  Similarity=0.278  Sum_probs=96.1

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99833899868899999868920210588886021278999739948999987984010123575321002345555321
Q gi|254780941|r   25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADI  104 (311)
Q Consensus        25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDi  104 (311)
T Consensus         2 il~lG~~~~GKTsll~~~~~~~~~~~--~p--Tig~~~~~i~~~~~~~~iwD~~G~--------e~~r~~~~~y~~~~~~   69 (158)
T cd04151           2 ILILGLDNAGKTTILYRLQLGEVVTT--IP--TIGFNVETVTYKNLKFQVWDLGGQ--------TSIRPYWRCYYSNTDA   69 (158)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCC--CC--CCCCCEEEEEECCEEEEEEECCCC--------CCCCHHHHHHCCCCCE
T ss_conf             99999999989999999970996775--78--488246999989889999967986--------2446278874667889


Q ss_pred             HCCCCHHHHHHHC-----CHHHHHHHHHHCCCCCEEEEEECCCHH---HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf             0011000010000-----000122345442872025787211010---43457888864100123343110001387426
Q gi|254780941|r  105 VCLVVDSHRELKV-----NIHDLLKEIAKRSSRLILILNKIDCVK---PERLLEQAEIANKLVFIEKTFMVSATKGHGCD  176 (311)
Q Consensus       105 il~VvDa~~~~~~-----~~~~il~~l~~~~~p~IiVlNKiDlv~---~~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid  176 (311)
T Consensus        70 ii~VvD~sd~~~~~~~~~~l~~~l~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~l~l~~~~~~~~~~~~tSA~tG~gV~  149 (158)
T cd04151          70 IIYVVDSTDRDRLGTAKEELHAMLEEEELKGAVLLVFANKQDMPGALSEAEISEKLGLSELKDRTWSIFKTSAIKGEGLD  149 (158)
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
T ss_conf             99997457878999999999999834653698199999766776577999999998598741699689996787893999


Q ss_pred             HHHHHHHH
Q ss_conf             78999998
Q gi|254780941|r  177 DVLNYLCS  184 (311)
Q Consensus       177 ~L~~~L~~  184 (311)
T Consensus       150 e~f~wL~~  157 (158)
T cd04151         150 EGMDWLVN  157 (158)
T ss_pred             HHHHHHHC
T ss_conf             99999856