>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=99.71 E-value=8.8e-17 Score=128.44 Aligned_cols=156 Identities=23% Similarity=0.286 Sum_probs=106.3 Q ss_pred EEEEECCCCCCHHHHHHHHHCCCE--------------------EEECCCCC-----------------CEEEEEEEEEE Q ss_conf 899833899868899999868920--------------------21058888-----------------60212789997 Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKV--------------------SIVTHKVQ-----------------TTRSIVRGIVS 66 (311) Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~v--------------------sivS~k~~-----------------TTr~~i~gi~~ 66 (311) T Consensus 1 Rv~v~GhVD~GKSTL~G~Lt~g~lDdGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~~~~~~~~~~~ 80 (224) T cd04165 1 RVAVVGNVDAGKSTLLGVLTQGELDNGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNHLSESDIEICE 80 (224) T ss_pred CEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEEC T ss_conf 98999485884889999985677422210677787761899972654411565540101453202134765442201213 Q ss_pred ECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHH--HHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHH Q ss_conf 3994899998798401012357532100234555--53210011000010000000122345442872025787211010 Q gi|254780941|r 67 EKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK--HADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVK 144 (311) Q Consensus 67 ~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~--~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~ 144 (311) T Consensus 81 ~~~k~it~iD~pG--------H~~y~kt~i~G~~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l~ip~~vvitKiDl~~ 152 (224) T cd04165 81 KSSKLVTFIDLAG--------HERYLKTTLFGLTGYAPDYAMLVVAANAGIIGMTKEHLGLALALNIPVFVVVTKIDLAP 152 (224) T ss_pred CCCCEEEEEECCC--------HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC T ss_conf 6786799997887--------39999999987635568989999317889779999999999983999899998977689 Q ss_pred HHHHHHHHHHHHH----------------------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC Q ss_conf 4345788886410----------------------------0123343110001387426789999983662 Q gi|254780941|r 145 PERLLEQAEIANK----------------------------LVFIEKTFMVSATKGHGCDDVLNYLCSTLPL 188 (311) Q Consensus 145 ~~~l~~~~~~~~~----------------------------~~~~~~i~~ISAk~g~Gid~L~~~L~~~lpe 188 (311) T Consensus 153 ~~~l~~~~~~i~~~lk~p~~~k~p~~v~~~~d~~~~a~~~~~~~ivPIf~vS~VtG~Gi~~L~~fL~-~LP~ 223 (224) T cd04165 153 ANILQETLKDLKRILKVPGVRKLPVPVKSDDDVVLAASNFSSERIVPIFQVSNVTGEGLDLLHAFLN-LLPL 223 (224) T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHH-HCCC T ss_conf 8999999999999970447556870216858899998648867774679976589879999999998-7699

HHsearch alignment for GI: 254780941 and conserved domain: cd04165