HHsearch alignment for GI: 254780941 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.85 E-value=1.9e-20 Score=152.20 Aligned_cols=154 Identities=21% Similarity=0.239 Sum_probs=102.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHH
Q ss_conf 12189983389986889999986892021058888602127899973994899998798401012357532100234555
Q gi|254780941|r 21 RSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100 (311)
Q Consensus 21 ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~ 100 (311)
T Consensus 13 k~~Ki~llG~~~vGKTsll~~~~~~~~~~~~pTig~~----~~~v~~~~~~~~iwDt~Gqe--------~~~~~~~~y~~ 80 (174)
T pfam00025 13 KEMRILILGLDNAGKTTILYKLKLGEIVTTIPTIGFN----VETVTYKNVKFTVWDVGGQE--------SLRPLWRNYFP 80 (174)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCE----EEEEEECCEEEEEEECCCCC--------CCCHHHHHHHC
T ss_conf 6669999999999889999999549988744746823----89999899999998279870--------23267998841
Q ss_pred HHHHHCCCCHHHHHHHCC-HHH----HHHHHHHCCCCCEEEEEECCCHHH---HHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 532100110000100000-001----223454428720257872110104---345788886410012334311000138
Q gi|254780941|r 101 HADIVCLVVDSHRELKVN-IHD----LLKEIAKRSSRLILILNKIDCVKP---ERLLEQAEIANKLVFIEKTFMVSATKG 172 (311)
Q Consensus 101 ~aDiil~VvDa~~~~~~~-~~~----il~~l~~~~~p~IiVlNKiDlv~~---~~l~~~~~~~~~~~~~~~i~~ISAk~g 172 (311)
T Consensus 81 ~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~~~~~~~~~~~~~~SAktG 160 (174)
T pfam00025 81 NTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMSEAEIRELLGLHELKSRPWEIQGCSAVTG 160 (174)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 78268999867867879999999999875423589708998725667678999999999978644179968999988679
Q ss_pred CCHHHHHHHHHHHC
Q ss_conf 74267899999836
Q gi|254780941|r 173 HGCDDVLNYLCSTL 186 (311)
Q Consensus 173 ~Gid~L~~~L~~~l 186 (311)
T Consensus 161 ~gI~e~f~~L~~~I 174 (174)
T pfam00025 161 EGLDEGLDWLSNYI 174 (174)
T ss_pred CCHHHHHHHHHHHC
T ss_conf 59899999999539