HHsearch alignment for GI: 254780941 and conserved domain: pfam05049

>pfam05049 IIGP Interferon-inducible GTPase (IIGP). Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing.
Probab=99.36  E-value=2.4e-12  Score=99.71  Aligned_cols=161  Identities=22%  Similarity=0.277  Sum_probs=110.3

Q ss_pred             EEEEEECCCCCCHHHHHHHHHCC----CEEEECCCCCCEEEEEEEEEEECCEE-EEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf             18998338998688999998689----20210588886021278999739948-99998798401012357532100234
Q gi|254780941|r   23 GCVALVGATNAGKSTLVNRFVGA----KVSIVTHKVQTTRSIVRGIVSEKESQ-IVFLDTPGIFNAKDSYHKLMIRLSWS   97 (311)
Q Consensus        23 g~VaivG~pN~GKSTL~N~l~g~----~vsivS~k~~TTr~~i~gi~~~~~~q-iifvDTPG~~~~~~~l~~~~~~~~~~   97 (311)
T Consensus        36 lnIavtGesG~GkSsfINalRg~g~e~~~aA~tGvvetT~~~~--~Y~hp~~pnV~lwDLPG~gt~~f~~~~Yl~~~---  110 (375)
T pfam05049        36 LKIAVTGDSGNGKSSFINALRGIGHEEDGSAPTGVVETTMKRT--PYSHPHFPNVVLWDLPGLGATNFTVETYLEEM---  110 (375)
T ss_pred             EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC--CCCCCCCCCEEEECCCCCCCCCCCHHHHHHHC---
T ss_conf             4799854899867899998747898777768768766326755--67899999807962899998998989999874---


Q ss_pred             HHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCC------------HHHHHHHHHHHHH-----HHC-C
Q ss_conf             555532100110000100000001223454428720257872110------------1043457888864-----100-1
Q gi|254780941|r   98 TIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDC------------VKPERLLEQAEIA-----NKL-V  159 (311)
Q Consensus        98 ~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDl------------v~~~~l~~~~~~~-----~~~-~  159 (311)
T Consensus       111 ~f~~yDfFiiis--s~rf~~n~v~LAk~i~~mgK~fyfVrtKvD~Dl~~e~~~kp~~F~~e~~Lq~IR~~c~~~L~k~gv  188 (375)
T pfam05049       111 KFSEYDFFIIIS--SERFSLNDVKLAKAIQRMGKRFYFVRTKLDSDLSNEQKGKPQTFPKEKVLQNIQDNCRNNLQKEGV  188 (375)
T ss_pred             CCCCCCEEEEEE--CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             856477899996--775432018999999983894799986236760657625899999899999999999999987588


Q ss_pred             CCCCCCCCCCC--CCCCHHHHHHHHHHHCCCCC
Q ss_conf             23343110001--38742678999998366223
Q gi|254780941|r  160 FIEKTFMVSAT--KGHGCDDVLNYLCSTLPLAP  190 (311)
Q Consensus       160 ~~~~i~~ISAk--~g~Gid~L~~~L~~~lpe~~  190 (311)
T Consensus       189 ~eP~VFLvSnfdl~~yDFp~L~~TL~~eLP~hK  221 (375)
T pfam05049       189 KEPPIFLVSNLDPSHYDFPKLRDTLLKDLPIIK  221 (375)
T ss_pred             CCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHH
T ss_conf             899789981788132681899999998736867