HHsearch alignment for GI: 254780941 and conserved domain: smart00053
>smart00053 DYNc Dynamin, GTPase. Large GTPases that mediate vesicle trafficking. Dynamin participates in the endocytic uptake of receptors, associated ligands, and plasma membrane following an exocytic event.
Probab=98.49 E-value=2.1e-07 Score=67.72 Aligned_cols=122 Identities=22% Similarity=0.296 Sum_probs=72.2
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEE---------------------------------------
Q ss_conf 89983389986889999986892021058888602127899---------------------------------------
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGI--------------------------------------- 64 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi--------------------------------------- 64 (311)
T Consensus 28 qiVVvGdQSsGKSSvLEaitGi~FlPr~~g-~cTR~p~~i~l~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~ 106 (240)
T smart00053 28 QIAVVGGQSAGKSSVLENFVGRDFLPRGSG-IVTRRPLILQLINSSTEYAEFLHCKGKKFTDFDEVRNEIEAETDRVTGT 106 (240)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCC-CEECCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 489988878758999999878875556897-2764406999733886512477437863489899999999988753267
Q ss_pred ------------EEEC-CEEEEEEECCCCHHHCCC-CC----CCCCCHHHHHHHHHH-HHCCCCHHHHHHH-CCHHHHHH
Q ss_conf ------------9739-948999987984010123-57----532100234555532-1001100001000-00001223
Q gi|254780941|r 65 ------------VSEK-ESQIVFLDTPGIFNAKDS-YH----KLMIRLSWSTIKHAD-IVCLVVDSHRELK-VNIHDLLK 124 (311)
Q Consensus 65 ------------~~~~-~~qiifvDTPG~~~~~~~-l~----~~~~~~~~~~l~~aD-iil~VvDa~~~~~-~~~~~il~ 124 (311)
T Consensus 107 ~~~~s~~~l~lei~gP~~p~LTlvDLPGl~~~~~~~q~~~~~~~v~~lv~~Yi~~p~tIILaVv~a~~D~anq~~l~lAr 186 (240)
T smart00053 107 NKGISPVPINLRVYSPHVLNLTLIDLPGITKVAVGDQPPDIEEQIKDMIKQFISKEECLILAVTPANVDLANSDALKLAK 186 (240)
T ss_pred CCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 88767885599994799988544147541246789985679999999999984798806999840785676619999999
Q ss_pred HHHHCCCCCEEEEEECCCHHHH
Q ss_conf 4544287202578721101043
Q gi|254780941|r 125 EIAKRSSRLILILNKIDCVKPE 146 (311)
Q Consensus 125 ~l~~~~~p~IiVlNKiDlv~~~ 146 (311)
T Consensus 187 ~~Dp~g~RTiGVlTKpDl~~~g 208 (240)
T smart00053 187 EVDPQGERTIGVITKLDLMDEG 208 (240)
T ss_pred HHCCCCCEEEEEECCCCCCCCC
T ss_conf 7199998289997353345777