HHsearch alignment for GI: 254780941 and conserved domain: smart00178

>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=99.69  E-value=3.5e-16  Score=124.57  Aligned_cols=152  Identities=19%  Similarity=0.254  Sum_probs=103.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             18998338998688999998689202105888860212789997399489999879840101235753210023455553
Q gi|254780941|r   23 GCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHA  102 (311)
Q Consensus        23 g~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~a  102 (311)
T Consensus        18 ~~ililGLd~aGKTTil~~lk~~~~~~~~PT~g~~~e----~~~~~~~~~~~wDlgG~~~~R--------~lW~~Yy~~~   85 (184)
T smart00178       18 AKILFLGLDNAGKTTLLHMLKNDRLAQHQPTQHPTSE----ELAIGNIKFTTFDLGGHQQAR--------RLWKDYFPEV   85 (184)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEE----EEEECCEEEEEEECCCCHHHH--------HHHHHHHCCC
T ss_conf             4799996588988999999806997530578788648----999999999999889877788--------9999882167


Q ss_pred             HHHCCCCHHHHHHHC-----CHHHHHHHHHHCCCCCEEEEEECCCHH---HHHHHHHHHHHH--HC-----CCCCCCCCC
Q ss_conf             210011000010000-----000122345442872025787211010---434578888641--00-----123343110
Q gi|254780941|r  103 DIVCLVVDSHRELKV-----NIHDLLKEIAKRSSRLILILNKIDCVK---PERLLEQAEIAN--KL-----VFIEKTFMV  167 (311)
Q Consensus       103 Diil~VvDa~~~~~~-----~~~~il~~l~~~~~p~IiVlNKiDlv~---~~~l~~~~~~~~--~~-----~~~~~i~~I  167 (311)
T Consensus        86 ~~iIfVVDssD~~r~~eak~~L~~ll~~~~l~~~PlLilaNKqDl~~a~~~~ei~~~L~L~~~~~~~~~~~~r~~~i~~~  165 (184)
T smart00178       86 NGIVYLVDAYDKERFAESKRELDALLSDEELATVPFLILGNKIDAPYAASEDELRYALGLTNTTGSKGKVGVRPLEVFMC  165 (184)
T ss_pred             CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEEEE
T ss_conf             58999972686889999999999986467655970999997567778999999998819512326557667763199973


Q ss_pred             CCCCCCCHHHHHHHHHHHC
Q ss_conf             0013874267899999836
Q gi|254780941|r  168 SATKGHGCDDVLNYLCSTL  186 (311)
Q Consensus       168 SAk~g~Gid~L~~~L~~~l  186 (311)
T Consensus       166 SA~tG~Gl~egl~WLs~~i  184 (184)
T smart00178      166 SVVRRMGYGEGFKWLSQYI  184 (184)
T ss_pred             ECCCCCCHHHHHHHHHHHC
T ss_conf             5607978699999998409