HHsearch alignment for GI: 254780942 and conserved domain: COG0110

Probab=98.22  E-value=3.3e-06  Score=53.80  Aligned_cols=99  Identities=27%  Similarity=0.416  Sum_probs=56.6

Q ss_pred             CCCCCCEEEECCCCCCC---CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf             34420002111631343---321211121002134432000002586443202310211247854487455566398899
Q gi|254780942|r  284 CGVSIENYVQIRAFSYL---EGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVGDSVVGKN  360 (442)
Q Consensus       284 ~~~~Ig~~~~I~~~~~i---~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~igd~~iG~~  360 (442)
T Consensus        66 ~~~~iG~~~~i~~~~~~~~~~~i~ig~~~~i~~~v~i~------~~~h~~~~~~~-~~~~--------~~~~~~v~IG~~  130 (190)
T COG0110          66 KNLTIGDLCFIGVNVVILVGEGITIGDNVVVGPNVTIY------TNSHPGDFVTA-NIGA--------LVGAGPVTIGED  130 (190)
T ss_pred             CCEEECCEEEEECCCEEEECCCCEECCCCEECCCEEEC------CCCCCCCCCCC-CCCC--------CCCCCCCEECCC
T ss_conf             21064634677025449834885889985895994982------68765652200-0143--------235789788998


Q ss_pred             CEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEE
Q ss_conf             8997980883445775456298788798869989378398899899
Q gi|254780942|r  361 VNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYV  406 (442)
Q Consensus       361 ~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i  406 (442)
T Consensus       131 vwIG~~a~Ilp-------GV~IG~gavigagsVVtk--dvp~~~iv  167 (190)
T COG0110         131 VWIGAGAVILP-------GVTIGEGAVIGAGSVVTK--DVPPYGIV  167 (190)
T ss_pred             CEECCCCEECC-------CEEECCCEEEECCEEEEC--CCCCCEEE
T ss_conf             58778978979-------859899819978858957--77998289