HHsearch alignment for GI: 254780942 and conserved domain: COG1208

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis].
Probab=99.32  E-value=2.3e-12  Score=88.80  Aligned_cols=89  Identities=27%  Similarity=0.377  Sum_probs=62.7

Q ss_pred             EEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCC
Q ss_conf             79941123317841001223223442000211163134332121112100213443200000258644320231021124
Q gi|254780942|r  262 VFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIK  341 (442)
Q Consensus       262 ~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~  341 (442)
T Consensus       256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~Sii~~~~~i~~~~~i~-~sIi~~~~~ig~~-----~-~-  327 (358)
T COG1208         256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEIKNSIIMDNVVIGHGSYIG-DSIIGENCKIGAS-----L-I-  327 (358)
T ss_pred             EEEECCEEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEEECCCEECCCCEEC-CEEECCCCEECCC-----C-E-
T ss_conf             388589498269789888486898789999888998778754887787988888882-0698188599986-----1-5-


Q ss_pred             CCCCCCCCCCCCCCEECCCCEECCCEE
Q ss_conf             785448745556639889989979808
Q gi|254780942|r  342 EGSKINHLSYVGDSVVGKNVNIGAGTI  368 (442)
Q Consensus       342 ~g~~i~~~~~igd~~iG~~~~ig~g~i  368 (442)
T Consensus       328 ----------i~d~~~g~~~~i~~g~~  344 (358)
T COG1208         328 ----------IGDVVIGINSEILPGVV  344 (358)
T ss_pred             ----------EEEEEECCCEEECCCEE
T ss_conf             ----------70158636608627618