HHsearch alignment for GI: 254780942 and conserved domain: COG1208
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis].
Probab=99.32 E-value=2.3e-12 Score=88.80 Aligned_cols=89 Identities=27% Similarity=0.377 Sum_probs=62.7
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCC
Q ss_conf 79941123317841001223223442000211163134332121112100213443200000258644320231021124
Q gi|254780942|r 262 VFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIK 341 (442)
Q Consensus 262 ~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~ 341 (442)
T Consensus 256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~Sii~~~~~i~~~~~i~-~sIi~~~~~ig~~-----~-~- 327 (358)
T COG1208 256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEIKNSIIMDNVVIGHGSYIG-DSIIGENCKIGAS-----L-I- 327 (358)
T ss_pred EEEECCEEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEEECCCEECCCCEEC-CEEECCCCEECCC-----C-E-
T ss_conf 388589498269789888486898789999888998778754887787988888882-0698188599986-----1-5-
Q ss_pred CCCCCCCCCCCCCCEECCCCEECCCEE
Q ss_conf 785448745556639889989979808
Q gi|254780942|r 342 EGSKINHLSYVGDSVVGKNVNIGAGTI 368 (442)
Q Consensus 342 ~g~~i~~~~~igd~~iG~~~~ig~g~i 368 (442)
T Consensus 328 ----------i~d~~~g~~~~i~~g~~ 344 (358)
T COG1208 328 ----------IGDVVIGINSEILPGVV 344 (358)
T ss_pred ----------EEEEEECCCEEECCCEE
T ss_conf ----------70158636608627618