HHsearch alignment for GI: 254780942 and conserved domain: COG1920

>COG1920 Predicted nucleotidyltransferase, CobY/MobA/RfbA family [General function prediction only].
Probab=94.36  E-value=0.076  Score=28.94  Aligned_cols=172  Identities=19%  Similarity=0.220  Sum_probs=93.5

Q ss_pred             EEEE---CCCCCCCCCCCCC----CCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             9994---5887723278887----44125884857999999999779977999957988999997302697289998599
Q gi|254780942|r    7 AIVL---AAGRGHRMKSSSS----KVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINFPPTLSVEYYIQDC   79 (442)
Q Consensus         7 AiIL---AaG~GtRl~p~~p----KpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~~   79 (442)
T Consensus         3 ~iIPvk~~~~aKTRLs~~lS~eeRe~~~----laML~dvi~Al~~~-~~~i~Vvtpd--e~~~~~a~~~----~vl~d~-   70 (210)
T COG1920           3 AIIPVKRLADAKTRLSPVLSAEERENFA----LAMLVDVLGALAGV-LGEITVVTPD--EEVLVPATKL----EVLADP-   70 (210)
T ss_pred             EEEECCCCCCCHHCCCCCCCHHHHHHHH----HHHHHHHHHHHHHH-CCCCEEECCC--HHHHHHCCCC----EEEECC-
T ss_conf             5886266676200133113988899999----99999999986400-4775287687--6762100034----045141-


Q ss_pred             CCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEECCCCC
Q ss_conf             88614466410000123446058985154111533220000001358610010010122157440420233310010014
Q gi|254780942|r   80 QQGTAHAVLTAQDAIKPGYDDVIIMYGDVPLVSSHTLKKAMDKIAQGYSIAVVGFNADNPKGYGRLLIKNNEIIAIREEN  159 (442)
Q Consensus        80 ~~GTa~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~~~~~~~i~~~~~~dp~~yGvV~~d~~~v~~i~Ek~  159 (442)
T Consensus        71 dL--N~Ai~aa~~~~~~p-~~v~vvmaDLPLl~~~~i~~~~~~~~d-~dvvia------P~~------gGGT--------  126 (210)
T COG1920          71 DL--NTAINAALDEIPLP-SEVIVVMADLPLLSPEHIERALSAAKD-ADVVIA------PGR------GGGT--------  126 (210)
T ss_pred             CH--HHHHHHHHHHCCCC-CCEEEEECCCCCCCHHHHHHHHHHCCC-CCEEEE------CCC------CCCE--------
T ss_conf             06--78999998627887-616998445543799999999973477-768982------079------9966--------


Q ss_pred             CCCCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHEECCCCCCCCCCCC
Q ss_conf             6675421000355600111250146777532888740011121148999973077179991721430111210000001
Q gi|254780942|r  160 DATDEERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEKARLDGKSIASIDVKEQEVCGCNNRYELSLIE  238 (442)
Q Consensus       160 d~~~~~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~l~~~g~~i~~~~~~~~~~~gv~~~~~L~~~~  238 (442)
T Consensus       127 ---------n----~L~~r~-~~~-~--~~y~g~SF-----~-~Hl~~Ark~G~~~~~~dSf-~l~~DVDtpeDL~e~~  181 (210)
T COG1920         127 ---------N----VLFARK-SAF-R--PRYGGVSF-----L-RHLEEARKRGLVVLTYDSF-GLSADVDTPEDLVEAF  181 (210)
T ss_pred             ---------E----EEEEEC-CCC-C--CCCCCCCH-----H-HHHHHHHHCCCEEEEECCC-CEECCCCCHHHHHHHH
T ss_conf             ---------7----899844-544-4--23468528-----8-8999998769889972354-1113779888999999