HHsearch alignment for GI: 254780942 and conserved domain: PRK05450

>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.
Probab=99.87  E-value=1.1e-21  Score=141.84  Aligned_cols=228  Identities=22%  Similarity=0.268  Sum_probs=152.1

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf             408999458877232788874412588485799999999977-9977999957988999997302697289998599886
Q gi|254780942|r    4 KRLAIVLAAGRGHRMKSSSSKVLQKIAGKPMISHVMETIAAA-GIENVALVLGYGAEEITRINFPPTLSVEYYIQDCQQG   82 (442)
Q Consensus         4 ~~~AiILAaG~GtRl~p~~pKpLlpi~gkpli~~~i~~l~~~-g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~~~~G   82 (442)
T Consensus         2 k~~~iIPAR~~SsR~-Pg--KpL~~I~GkpmI~~v~~~a~~~~~~~~V~VAT--dd~~I~~~~~~~g~~~imTs~~h~~G   76 (248)
T PRK05450          2 KFVVIIPARYASTRL-PG--KPLADIGGKPMIVRVYERASKASGADRVVVAT--DDERIADAVEAFGGEVVMTSADHPSG   76 (248)
T ss_pred             CEEEEEECCCCCCCC-CC--CCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEE--CCHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf             779998079778789-98--62024189698999999999668988299970--88524435315686234046454770


Q ss_pred             HHHHHHHCCCCCCCCCCEE-EEEECCCCCCCCCCCCCCCCCCCCCC--CCCCEEEECC------CCCCCCEEEECCCCCE
Q ss_conf             1446641000012344605-89851541115332200000013586--1001001012------2157440420233310
Q gi|254780942|r   83 TAHAVLTAQDAIKPGYDDV-IIMYGDVPLVSSHTLKKAMDKIAQGY--SIAVVGFNAD------NPKGYGRLLIKNNEII  153 (442)
Q Consensus        83 Ta~Ai~~a~~~l~~~~~~~-lVl~GD~~li~~~~l~~l~~~~~~~~--~~~i~~~~~~------dp~~yGvV~~d~~~v~  153 (442)
T Consensus        77 T-dRi~Ea~~~l~~~~~d~IInvQGDEPli~p~~I~~li~~~~~~~~~~i~tl~~~~~~~~~~~d~n~VKvv~~~~~~al  155 (248)
T PRK05450         77 T-DRIAEAAAKLGLSDDDIVVNVQGDEPLIPPELIDQVAEPLAAHPEADMATLAVPIDDEEELFNPNVVKVVLDKNGYAL  155 (248)
T ss_pred             H-HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCEE
T ss_conf             3-899999985087778689993598677899999999999985886639999986288899608883489989999840


Q ss_pred             ECCCCCCC------CCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH--HHHHHCCEEEEEECHHHE
Q ss_conf             01001466------7542100035560011125014677753288874001112114899--997307717999172143
Q gi|254780942|r  154 AIREENDA------TDEERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEK--ARLDGKSIASIDVKEQEV  225 (442)
Q Consensus       154 ~i~Ek~d~------~~~~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~--l~~~g~~i~~~~~~~~~~  225 (442)
T Consensus       156 yfSRs~IP~~~~~~~~~~~~~~~~hiGiy~f~~~~L~~f~~-l~~s~l--E--~~E~lEqLR~leng~~I~~~~~~~~~~  230 (248)
T PRK05450        156 YFSRAPIPWGRDAADPTAPTPVYRHIGIYAYRRGFLRRFVS-LPPSPL--E--QIESLEQLRALENGYRIHVAVVDEAPS  230 (248)
T ss_pred             EEECCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHH-CCCCHH--H--HHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             55426787544432123555516899988600999999874-699814--6--565269999998599579999678999


Q ss_pred             ECCCCCCCCCCCCCCCC
Q ss_conf             01112100000012222
Q gi|254780942|r  226 CGCNNRYELSLIENIWQ  242 (442)
Q Consensus       226 ~gv~~~~~L~~~~~~~~  242 (442)
T Consensus       231 ~~VDT~eDl~~v~~~lk  247 (248)
T PRK05450        231 PGVDTPEDLERVRALLA  247 (248)
T ss_pred             CCCCCHHHHHHHHHHHC
T ss_conf             99779999999999866