HHsearch alignment for GI: 254780942 and conserved domain: PRK05450
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.
Probab=99.87 E-value=1.1e-21 Score=141.84 Aligned_cols=228 Identities=22% Similarity=0.268 Sum_probs=152.1
Q ss_pred CCEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 408999458877232788874412588485799999999977-9977999957988999997302697289998599886
Q gi|254780942|r 4 KRLAIVLAAGRGHRMKSSSSKVLQKIAGKPMISHVMETIAAA-GIENVALVLGYGAEEITRINFPPTLSVEYYIQDCQQG 82 (442)
Q Consensus 4 ~~~AiILAaG~GtRl~p~~pKpLlpi~gkpli~~~i~~l~~~-g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~~~~G 82 (442)
T Consensus 2 k~~~iIPAR~~SsR~-Pg--KpL~~I~GkpmI~~v~~~a~~~~~~~~V~VAT--dd~~I~~~~~~~g~~~imTs~~h~~G 76 (248)
T PRK05450 2 KFVVIIPARYASTRL-PG--KPLADIGGKPMIVRVYERASKASGADRVVVAT--DDERIADAVEAFGGEVVMTSADHPSG 76 (248)
T ss_pred CEEEEEECCCCCCCC-CC--CCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEE--CCHHHHHHHHCCCCCEEECCCCCCCC
T ss_conf 779998079778789-98--62024189698999999999668988299970--88524435315686234046454770
Q ss_pred HHHHHHHCCCCCCCCCCEE-EEEECCCCCCCCCCCCCCCCCCCCCC--CCCCEEEECC------CCCCCCEEEECCCCCE
Q ss_conf 1446641000012344605-89851541115332200000013586--1001001012------2157440420233310
Q gi|254780942|r 83 TAHAVLTAQDAIKPGYDDV-IIMYGDVPLVSSHTLKKAMDKIAQGY--SIAVVGFNAD------NPKGYGRLLIKNNEII 153 (442)
Q Consensus 83 Ta~Ai~~a~~~l~~~~~~~-lVl~GD~~li~~~~l~~l~~~~~~~~--~~~i~~~~~~------dp~~yGvV~~d~~~v~ 153 (442)
T Consensus 77 T-dRi~Ea~~~l~~~~~d~IInvQGDEPli~p~~I~~li~~~~~~~~~~i~tl~~~~~~~~~~~d~n~VKvv~~~~~~al 155 (248)
T PRK05450 77 T-DRIAEAAAKLGLSDDDIVVNVQGDEPLIPPELIDQVAEPLAAHPEADMATLAVPIDDEEELFNPNVVKVVLDKNGYAL 155 (248)
T ss_pred H-HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCEE
T ss_conf 3-899999985087778689993598677899999999999985886639999986288899608883489989999840
Q ss_pred ECCCCCCC------CCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH--HHHHHCCEEEEEECHHHE
Q ss_conf 01001466------7542100035560011125014677753288874001112114899--997307717999172143
Q gi|254780942|r 154 AIREENDA------TDEERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEK--ARLDGKSIASIDVKEQEV 225 (442)
Q Consensus 154 ~i~Ek~d~------~~~~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~--l~~~g~~i~~~~~~~~~~ 225 (442)
T Consensus 156 yfSRs~IP~~~~~~~~~~~~~~~~hiGiy~f~~~~L~~f~~-l~~s~l--E--~~E~lEqLR~leng~~I~~~~~~~~~~ 230 (248)
T PRK05450 156 YFSRAPIPWGRDAADPTAPTPVYRHIGIYAYRRGFLRRFVS-LPPSPL--E--QIESLEQLRALENGYRIHVAVVDEAPS 230 (248)
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHH-CCCCHH--H--HHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 55426787544432123555516899988600999999874-699814--6--565269999998599579999678999
Q ss_pred ECCCCCCCCCCCCCCCC
Q ss_conf 01112100000012222
Q gi|254780942|r 226 CGCNNRYELSLIENIWQ 242 (442)
Q Consensus 226 ~gv~~~~~L~~~~~~~~ 242 (442)
T Consensus 231 ~~VDT~eDl~~v~~~lk 247 (248)
T PRK05450 231 PGVDTPEDLERVRALLA 247 (248)
T ss_pred CCCCCHHHHHHHHHHHC
T ss_conf 99779999999999866