HHsearch alignment for GI: 254780942 and conserved domain: TIGR03202
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=99.72 E-value=4.1e-17 Score=115.84 Aligned_cols=121 Identities=20% Similarity=0.301 Sum_probs=96.9
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHC--CCCCEEEEEEC-CCCCC
Q ss_conf 8999458877232788874412588485799999999977997799995798899999730--26972899985-99886
Q gi|254780942|r 6 LAIVLAAGRGHRMKSSSSKVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINF--PPTLSVEYYIQ-DCQQG 82 (442)
Q Consensus 6 ~AiILAaG~GtRl~p~~pKpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~--~~~~~i~~v~q-~~~~G 82 (442)
T Consensus 2 ~aiILAAG~S~RmG--~~KlLl~~~g~~ll~~~~~~~~~~~~~~vvVV~g~~~~~~~~~~~~~~~~~~~~~v~n~~~~~G 79 (190)
T TIGR03202 2 VAIYLAAGQSRRMG--ENKLALPLGETTLGSASLKTALSSRLSKVIVVIGEKYAHLSWLDPYLLADERIMLVCCRDACEG 79 (190)
T ss_pred EEEEECCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 79997998766899--8842385099119999999998669981999818718888766787633487499968986546
Q ss_pred HHHHHHHCCCCCC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1446641000012-344605898515411153322000000135861
Q gi|254780942|r 83 TAHAVLTAQDAIK-PGYDDVIIMYGDVPLVSSHTLKKAMDKIAQGYS 128 (442)
Q Consensus 83 Ta~Ai~~a~~~l~-~~~~~~lVl~GD~~li~~~~l~~l~~~~~~~~~ 128 (442)
T Consensus 80 ~~sSi~~Gl~~~~~~~~d~~li~l~D~P~l~~~~i~~L~~~~~~~~~ 126 (190)
T TIGR03202 80 QAHSLKCGLRKAEAMGADAVVILLADQPFLTADVINALLALAKRRPD 126 (190)
T ss_pred CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 07999999997436688969996489778899999999999985899