HHsearch alignment for GI: 254780942 and conserved domain: cd00208
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=99.09 E-value=2.7e-10 Score=77.06 Aligned_cols=34 Identities=32% Similarity=0.635 Sum_probs=24.8
Q ss_pred CCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEE
Q ss_conf 63988998997980883445775456298788798869989
Q gi|254780942|r 354 DSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSL 394 (442)
Q Consensus 354 d~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i 394 (442)
T Consensus 44 ~~~Ig~~v~Ig~~a~I~~-------gv~IGdn~~IgagavV 77 (78)
T cd00208 44 PTIIGDNVEIGANAVIHG-------GVKIGDNAVIGAGAVV 77 (78)
T ss_pred CCEECCCEEECCCCEEEC-------CEEECCCCEECCCCEE
T ss_conf 989999969986898979-------8199999999988569