HHsearch alignment for GI: 254780942 and conserved domain: cd00897
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose. UGPase (UDP-Glucose Pyrophosphorylase) catalyzes the reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids, glycoproteins, and proteoglycans. UGPase is found in both prokaryotes and eukaryotes. Interestingly, while the prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity. This family consists of mainly eukaryotic UTP-glucose-1-phosphate uridylyltransferases.
Probab=98.68 E-value=2.5e-06 Score=54.43 Aligned_cols=74 Identities=20% Similarity=0.385 Sum_probs=51.2
Q ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEC-CEEHHHHHHHHHHH----CCCC-EEEEEECCCH-HHHHHHHCC---CCCEEE
Q ss_conf 408999458877232788874412588-48579999999997----7997-7999957988-999997302---697289
Q gi|254780942|r 4 KRLAIVLAAGRGHRMKSSSSKVLQKIA-GKPMISHVMETIAA----AGIE-NVALVLGYGA-EEITRINFP---PTLSVE 73 (442)
Q Consensus 4 ~~~AiILAaG~GtRl~p~~pKpLlpi~-gkpli~~~i~~l~~----~g~~-~ivvv~~~~~-e~i~~~~~~---~~~~i~ 73 (442)
T Consensus 3 k~avlkLnGGlGTrlG~~~pK~~i~V~~~~tfldl~~~qi~~l~~~yg~~vPl~iMtS~~T~~~T~~~l~ky~~~~~~i~ 82 (300)
T cd00897 3 KLVVLKLNGGLGTSMGCTGPKSLIEVRDGKTFLDLTVQQIEHLNKTYGVDVPLVLMNSFNTDEDTKKILKKYAGVNVDIH 82 (300)
T ss_pred CEEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 37999926987455688998177882899809999999999999971998318997886477899999997488788769
Q ss_pred EEEC
Q ss_conf 9985
Q gi|254780942|r 74 YYIQ 77 (442)
Q Consensus 74 ~v~q 77 (442)
T Consensus 83 ~F~Q 86 (300)
T cd00897 83 TFNQ 86 (300)
T ss_pred EEEC
T ss_conf 9843