HHsearch alignment for GI: 254780942 and conserved domain: cd02523

>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=100.00  E-value=1.8e-41  Score=254.47  Aligned_cols=221  Identities=20%  Similarity=0.328  Sum_probs=163.7

Q ss_pred             EEEECCCCCCCCCCC---CCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECC--CCC
Q ss_conf             999458877232788---874412588485799999999977997799995798899999730269728999859--988
Q gi|254780942|r    7 AIVLAAGRGHRMKSS---SSKVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINFPPTLSVEYYIQD--CQQ   81 (442)
Q Consensus         7 AiILAaG~GtRl~p~---~pKpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~--~~~   81 (442)
T Consensus         1 AiILAaG~GtRl~plT~~~PK~L~~i~gkpli~~~i~~l~~~gi~~i~iv~gy~~e~i~~~~~~-~~~i~~i~n~~~~~~   79 (229)
T cd02523           1 AIILAAGRGSRLRPLTEDRPKCLLEINGKPLLERQIETLKEAGIDDIVIVTGYKKEQIEELLKK-YPNIKFVYNPDYAET   79 (229)
T ss_pred             CEEECCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHH-CCCCCCEEEEECCCC
T ss_conf             9893687765688645798803217998799999999999849985366555489999999853-136540340002367


Q ss_pred             CHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEECCCCCCC
Q ss_conf             61446641000012344605898515411153322000000135861001001012215744042023331001001466
Q gi|254780942|r   82 GTAHAVLTAQDAIKPGYDDVIIMYGDVPLVSSHTLKKAMDKIAQGYSIAVVGFNADNPKGYGRLLIKNNEIIAIREENDA  161 (442)
Q Consensus        82 GTa~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~~~~~~~i~~~~~~dp~~yGvV~~d~~~v~~i~Ek~d~  161 (442)
T Consensus        80 g~~~sl~~a~~~~~---~~~lv~~gD~-i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (229)
T cd02523          80 NNIYSLYLARDFLD---EDFLLLEGDV-VFDPSILERLL-SSPADNAILVDKKTKEWEDEYVKDLDDAGVLLGIISKAKN  154 (229)
T ss_pred             CHHHHHHHHHHHCC---CCEEEEECCE-ECCHHHHHHHH-HCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCC
T ss_conf             82999998887558---9859995776-54667999998-4778887999956457787447994268708999868999


Q ss_pred             CCCCCCCCCCCCCHHEECCHHH---HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHEECCCCCCCCCCCC
Q ss_conf             7542100035560011125014---6777532888740011121148999973077179991721430111210000001
Q gi|254780942|r  162 TDEERKIHYCNSGLMAIDGLYI---MDWLLQIKKNKVSQEYYLTDIIEKARLDGKSIASIDVKEQEVCGCNNRYELSLIE  238 (442)
Q Consensus       162 ~~~~~~~~lin~GiY~f~~~~L---~~~l~~l~~~~~~gE~yltDii~~l~~~g~~i~~~~~~~~~~~gv~~~~~L~~~~  238 (442)
T Consensus       155 ~~---~~~~~~~Gi~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~i~~li~~~~-~~~~~~~~~~W~dIgt~edl~~Ae  229 (229)
T cd02523         155 LE---EIQGEYVGISKFSPEDADRLAEALEELIEAG-RVNLYYEDALQRLISEEG-VKVKDISDGFWYEIDDLEDLERAE  229 (229)
T ss_pred             CC---CCCCEEEEEEEECHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHCCC-CEEEECCCCEEEECCCHHHHHHHC
T ss_conf             88---7462899999998999999999999728677-787239999999980799-669984893199696999999649