HHsearch alignment for GI: 254780942 and conserved domain: cd03353
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=100.00 E-value=0 Score=297.12 Aligned_cols=176 Identities=51% Similarity=0.821 Sum_probs=162.9
Q ss_pred CCCEEECCCEEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCC-----------------CCCCCCCCCCC
Q ss_conf 3210211527994112331784100122322344200021116313433212-----------------11121002134
Q gi|254780942|r 253 GVTMIAPETVFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVH-----------------IGKKTIIGPFA 315 (442)
Q Consensus 253 gv~~~~p~~~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~-----------------Ig~~~~Ig~~~ 315 (442)
T Consensus 1 gv~~i~p~s~~I~~~v~IG~~v~I~p~~~I~~~v~IG~~~~Ig~~~~I~~~~IG~~~~I~~~~vi~~~~ig~~~~IG~~~ 80 (193)
T cd03353 1 GVTLIDPETTYIDGDVEIGVDVVIDPGVILEGKTVIGEDCVIGPNCVIKDSTIGDGVVIKASSVIEGAVIGNGATVGPFA 80 (193)
T ss_pred CCEEECCCEEEECCCCEECCCCEECCCEEEECCCEECCCCEECCCEEECCCEECCCCEECCCEECCCCEECCCCEECCCE
T ss_conf 98795898069999829999999989829929859999989957345778688887400210011352517652666850
Q ss_pred CCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEE
Q ss_conf 43200000258644320231021124785448745556639889989979808834457754562987887988699893
Q gi|254780942|r 316 RIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLI 395 (442)
Q Consensus 316 ~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~ 395 (442)
T Consensus 81 ~i~~~~~I~~~~~iG~~v~i~~~~ig~~~~i~h~~~igd~~Ig~~v~Ig~~~i~~n~~g~~~~~t~IGd~v~IG~~~~i~ 160 (193)
T cd03353 81 HLRPGTVLGEGVHIGNFVEIKKSTIGEGSKANHLSYLGDAEIGEGVNIGAGTITCNYDGVNKHRTVIGDNVFIGSNSQLV 160 (193)
T ss_pred EECCCCEECCEEEECCCEEEECCCCCCCCEECCEEECCCCEECCCCEECCCEEEECCCCCCCCCCEECCCCEECCCCEEE
T ss_conf 76587688751674253576444336884877244618856777888866758873434335623433561898898798
Q ss_pred CCEEECCCCEECCCCEECCCCCCCCEEEECCCE
Q ss_conf 783988998997783576643698689813560
Q gi|254780942|r 396 APITIGQGTYVASGSIITQDTPENSLVFARSRQ 428 (442)
Q Consensus 396 ~gv~ig~~~~i~ag~~v~~dv~~~~~v~~~~~~ 428 (442)
T Consensus 161 ~~v~IG~~a~Igags~V~kdVpp~~lvvg~~~~ 193 (193)
T cd03353 161 APVTIGDGATIAAGSTITKDVPPGALAIARARQ 193 (193)
T ss_pred CCEEECCCCEECCCCEECCCCCCCCEEEEECCC
T ss_conf 983999998998698888423999789962489