HHsearch alignment for GI: 254780942 and conserved domain: cd03356
>cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma. Most members of this family contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold, followed by a LbH fold domain with at least 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). eIF-2B epsilon contains an additional domain of unknown function at the C-terminus. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.32 E-value=1.2e-12 Score=90.51 Aligned_cols=77 Identities=22% Similarity=0.310 Sum_probs=52.7
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCEECCCE
Q ss_conf 00021116313433212111210021344320000025864432023102112478544874555663988998997980
Q gi|254780942|r 288 IENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVGDSVVGKNVNIGAGT 367 (442)
Q Consensus 288 Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~igd~~iG~~~~ig~g~ 367 (442)
T Consensus 2 IG~~~~Ig~~~~I~~svIG~~c~Ig~~~~I~-~Sii~~~~~Ig~~~~i~~sII~~~~-----------~Ig~~~~i~~~- 68 (79)
T cd03356 2 IGESTVIGENAIIKNSVIGDNVRIGDGVTIT-NSILMDNVTIGANSVIVDSIIGDNA-----------VIGENVRVVNL- 68 (79)
T ss_pred CCCCCEECCCCEEECCEECCCCEECCCCEEE-EEEEECCCEECCCCEEECCEECCCC-----------EECCCCEEECC-
T ss_conf 9897999999999599999999999996996-1099797999999999699994989-----------99999999288-
Q ss_pred EECCCCCCCCCCCEECCCCEEC
Q ss_conf 8834457754562987887988
Q gi|254780942|r 368 ITCNYDGTHKYKTHINENAFIG 389 (442)
Q Consensus 368 i~~n~~g~~~~~~~ig~~~~iG 389 (442)
T Consensus 69 ------------~viG~~~~I~ 78 (79)
T cd03356 69 ------------CIIGDDVVVE 78 (79)
T ss_pred ------------CEECCCCEEC
T ss_conf ------------3997995988