HHsearch alignment for GI: 254780942 and conserved domain: cd03360
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=99.58 E-value=2e-15 Score=106.21 Aligned_cols=99 Identities=28% Similarity=0.411 Sum_probs=61.5
Q ss_pred CCEEECCCEEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEE
Q ss_conf 21021152799411233178410012232234420002111631343321211121002134432000002586443202
Q gi|254780942|r 254 VTMIAPETVFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFC 333 (442)
Q Consensus 254 v~~~~p~~~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ 333 (442)
T Consensus 84 ~niIhp~-a~i~~~~~ig~G~~I~~~~~i~~~~~IG~~~~i~~~~-----~i~Hd~~ig~~~~i~~~~~i~g~v~Ig~~- 156 (197)
T cd03360 84 ATLIHPS-AVVSPSAVIGEGCVIMAGAVINPDARIGDNVIINTGA-----VIGHDCVIGDFVHIAPGVVLSGGVTIGEG- 156 (197)
T ss_pred EEEECCC-CEECCCCEECCCCEEECCCEECCCCCCCCEEEECCCH-----HCCCCCCCCCCCEECCCEEECCCEEEEEE-
T ss_conf 8999999-5987774799942993175986565304368987700-----10531501310106672367783089121-
Q ss_pred EEECCCCCCCCCCCCCCCCCCCEECCCCEECCCEE
Q ss_conf 31021124785448745556639889989979808
Q gi|254780942|r 334 EVKKATIKEGSKINHLSYVGDSVVGKNVNIGAGTI 368 (442)
Q Consensus 334 ei~~s~i~~g~~i~~~~~igd~~iG~~~~ig~g~i 368 (442)
T Consensus 157 ----~~iG~~~~i~~-----~i~Ig~~~~igags~ 182 (197)
T cd03360 157 ----AFIGAGATIIQ-----GVTIGAGAIIGAGAV 182 (197)
T ss_pred ----CCCCCCCEECC-----CCEECCCCEECCCCE
T ss_conf ----62989989879-----989999999997998