HHsearch alignment for GI: 254780942 and conserved domain: cd05825
>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E. coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.
Probab=98.54 E-value=6.4e-08 Score=63.49 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=32.5
Q ss_pred CCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEE
Q ss_conf 663988998997980883445775456298788798869989378398899899
Q gi|254780942|r 353 GDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYV 406 (442)
Q Consensus 353 gd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i 406 (442)
T Consensus 55 ~~v~Ig~~v~IG~~~~I~~-------gv~Ig~~svVgagSvV~kd--vp~~~i~ 99 (107)
T cd05825 55 APIVIGDGAWVAAEAFVGP-------GVTIGEGAVVGARSVVVRD--LPAWTVY 99 (107)
T ss_pred CCEEECCCCEECCCCEEEC-------CCEECCCCEEECCCEECCC--CCCCCEE
T ss_conf 9979938858749878969-------9191899799489889038--5999799