HHsearch alignment for GI: 254780942 and conserved domain: cd06437
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=93.89 E-value=0.39 Score=24.86 Aligned_cols=97 Identities=13% Similarity=0.137 Sum_probs=61.9
Q ss_pred EEEECCE-EHHHHHHHHHHHCCC--C--EEEEEECCCH---HHHHHH---HCCCCCEEEEEECCCCCC-HHHHHHHCCCC
Q ss_conf 1258848-579999999997799--7--7999957988---999997---302697289998599886-14466410000
Q gi|254780942|r 26 LQKIAGK-PMISHVMETIAAAGI--E--NVALVLGYGA---EEITRI---NFPPTLSVEYYIQDCQQG-TAHAVLTAQDA 93 (442)
Q Consensus 26 Llpi~gk-pli~~~i~~l~~~g~--~--~ivvv~~~~~---e~i~~~---~~~~~~~i~~v~q~~~~G-Ta~Ai~~a~~~ 93 (442)
T Consensus 6 iIPa~NE~~~I~~~l~sl~~q~YP~~~~~I~VvDdstD~t~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Ka~aln~gl~~ 85 (232)
T cd06437 6 QLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALAEGMKV 85 (232)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99558988999999999996799998089999979996699999999976664199689983698888669999999997
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 12344605898515411153322000000135
Q gi|254780942|r 94 IKPGYDDVIIMYGDVPLVSSHTLKKAMDKIAQ 125 (442)
Q Consensus 94 l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~~ 125 (442)
T Consensus 86 a~g--d~i~~~DaD~-~~~~d~L~~~~~~f~~ 114 (232)
T cd06437 86 AKG--EYVAIFDADF-VPPPDFLQKTPPYFAD 114 (232)
T ss_pred CCC--CEEEEECCCC-CCCHHHHHHHHHHHCC
T ss_conf 789--8899977644-7384799999998319