HHsearch alignment for GI: 254780942 and conserved domain: cd06915
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=100.00 E-value=0 Score=289.23 Aligned_cols=215 Identities=21% Similarity=0.303 Sum_probs=179.3
Q ss_pred EEEECCCCCCCCCCC---CCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCC---CCEEEEEECCCC
Q ss_conf 999458877232788---87441258848579999999997799779999579889999973026---972899985998
Q gi|254780942|r 7 AIVLAAGRGHRMKSS---SSKVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINFPP---TLSVEYYIQDCQ 80 (442)
Q Consensus 7 AiILAaG~GtRl~p~---~pKpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~~~---~~~i~~v~q~~~ 80 (442)
T Consensus 1 AvIlAaG~GtRl~p~T~~~PKpLl~i~gkpli~~~l~~l~~~gi~~iii~~~~~~~~i~~~~~~~~~~~~~i~~~~e~~~ 80 (223)
T cd06915 1 AVILAGGLGTRLRSVVKDLPKPLAPVAGRPFLEYLLEYLARQGISRIVLSVGYLAEQIEEYFGDGYRGGIRIYYVIEPEP 80 (223)
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEE
T ss_conf 98947878867881107998311289999899999999997599778873010234334433102345776147886423
Q ss_pred CCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCEEEEC-CCCCEECCCC
Q ss_conf 861446641000012344605898515411153322000000135-86100100101221574404202-3331001001
Q gi|254780942|r 81 QGTAHAVLTAQDAIKPGYDDVIIMYGDVPLVSSHTLKKAMDKIAQ-GYSIAVVGFNADNPKGYGRLLIK-NNEIIAIREE 158 (442)
Q Consensus 81 ~GTa~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~~-~~~~~i~~~~~~dp~~yGvV~~d-~~~v~~i~Ek 158 (442)
T Consensus 81 lGt~gal~~a~~~i~~--~~flv~~gD~--~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~i~~~~eK 156 (223)
T cd06915 81 LGTGGAIKNALPKLPE--DQFLVLNGDT--YFDVDLLALLAALRASGADATMALRRVPDASRYGNVTVDGDGRVIAFVEK 156 (223)
T ss_pred CCHHHHHHHHHHHCCC--CCEEEECCCE--EECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCEEEEEEC
T ss_conf 6468899888863699--9889982771--12677899999998579978999998998302785898797314234754
Q ss_pred CCCCCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHEECCCCCCCCCCCC
Q ss_conf 46675421000355600111250146777532888740011121148999973077179991721430111210000001
Q gi|254780942|r 159 NDATDEERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEKARLDGKSIASIDVKEQEVCGCNNRYELSLIE 238 (442)
Q Consensus 159 ~d~~~~~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~l~~~g~~i~~~~~~~~~~~gv~~~~~L~~~~ 238 (442)
T Consensus 157 ~~----~~~~~~i~~Giyi~~~~-i~~~~~~~~---~~---~~~d~~~~li~~~-~v~~~~~~g~w-~DiGt~e~~~~A~ 223 (223)
T cd06915 157 GP----GAAPGLINGGVYLLRKE-ILAEIPADA---FS---LEADVLPALVKRG-RLYGFEVDGYF-IDIGIPEDYARAQ 223 (223)
T ss_pred CC----CCCCCEEEEEEEEECHH-HHHHHHCCC---CC---CHHHHHHHHHHCC-CEEEEEECCEE-EECCCHHHHHHHC
T ss_conf 89----87668244638999899-997414259---97---2799999998349-97999979919-9798989999739