HHsearch alignment for GI: 254780943 and conserved domain: COG0166

Probab=98.04  E-value=0.00023  Score=49.35  Aligned_cols=110  Identities=18%  Similarity=0.071  Sum_probs=74.6

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE-----ECCHHHC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             65510352036543079999999986256673143-----0420100-12334455505775267881899999999863
Q gi|254780943|r  289 NISGLLVSSCGTSYLAGLVGKFWFERLARLKVEID-----VSSEFRY-RDFVYSSKWASLFISQSGETADTLASLRYMRT  362 (608)
Q Consensus       289 ~~~~I~~vGcGTSy~Aal~~~~~~e~~~~i~v~v~-----~asEf~y-~~~~~~~~tlvI~iSQSGeT~dti~Al~~ak~  362 (608)
T Consensus        78 ~~~~iV~IGIGGS~LG~~~~~~aL~~~~~~~~~~~Fv~nid~~~~~~~l~~i~~~~tl~iviSKSGtT~Et~~n~~~~r~  157 (446)
T COG0166          78 KITDIVNIGIGGSDLGPRAVTEALRPYAPNGPRVHFVSNVDPTYLAEVLKKLDPETTLFIVISKSGTTLETLTNFRLARK  157 (446)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             74439997875558999999998644046887459825788223467885268562799999589895889988999999


Q ss_pred             CC-------CCEEEEECCCCCCCCCCCC------CCCCCCCCCCCCCCH
Q ss_conf             02-------4424651178763100024------101367420011000
Q gi|254780943|r  363 QG-------LTIGSLVNVLESTIARESD------FIFPIKAGPEIGVAS  398 (608)
Q Consensus       363 ~g-------~~tiaItN~~~S~la~~aD------~~i~~~aG~Ei~Vas  398 (608)
T Consensus       158 ~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~f~ipd~VGGRfS~~S  206 (446)
T COG0166         158 WLEKKEEAAKKHFVATSTNGGALAVLAGENGLETFEIPDWVGGRYSVLS  206 (446)
T ss_pred             HHHHHHHHHHCEEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHH
T ss_conf             9986466451479998287157888617785038988788887104027