HHsearch alignment for GI: 254780943 and conserved domain: PRK02947
>PRK02947 hypothetical protein; Provisional.
Probab=98.51 E-value=7.9e-07 Score=66.51 Aligned_cols=123 Identities=16% Similarity=0.148 Sum_probs=78.9
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CEEEEC-----------CHH----------HCCCCCCCCCCEEEE
Q ss_conf 2356551035203654307999999998625667-314304-----------201----------001233445550577
Q gi|254780943|r 286 DFANISGLLVSSCGTSYLAGLVGKFWFERLARLK-VEIDVS-----------SEF----------RYRDFVYSSKWASLF 343 (608)
Q Consensus 286 ~~~~~~~I~~vGcGTSy~Aal~~~~~~e~~~~i~-v~v~~a-----------sEf----------~y~~~~~~~~tlvI~ 343 (608)
T Consensus 37 si~~gg~i~~fGtGHS---~~~a~E~f~RAGGla~~~pI~~~~l~~~~g~~~s~~~ER~~g~a~~il~~~~i~~~Dvlii 113 (247)
T PRK02947 37 SIANGGRIYVFGTGHS---HMAAEEVFYRAGGLAPFNPILEPSLMLHEGAVASSYLERIEGYAKLILDRYPIRPGDVLII 113 (247)
T ss_pred HHHCCCEEEEECCCCH---HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCEEEE
T ss_conf 9975997999888516---4899987411476433130034110254786665312225509999998679999988999
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCCCCCCCCCCCCC----------CCCCHHHHH
Q ss_conf 526788189999999986302442465117876-----------31000241013674200----------110007888
Q gi|254780943|r 344 ISQSGETADTLASLRYMRTQGLTIGSLVNVLES-----------TIARESDFIFPIKAGPE----------IGVASTKAF 402 (608)
Q Consensus 344 iSQSGeT~dti~Al~~ak~~g~~tiaItN~~~S-----------~la~~aD~~i~~~aG~E----------i~VasTKsf 402 (608)
T Consensus 114 ~SnSG~N~~pVE~A~~ak~~G~~VIaiTS~~~s~~~~srH~SGkkL~d~aDiviDN~~p~GDA~l~i~g~~~kvgp~STi 193 (247)
T PRK02947 114 VSNSGRNAVPIEMALEAKERGAKVIAVTSLAYSKSVASRHSSGKRLYEVADVVIDNGAPKGDAVLEIEGLEAKVGPTSTV 193 (247)
T ss_pred EECCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCEEHHHCCEEEECCCCCCCEEEEECCCCCCCCCHHHH
T ss_conf 96787776899999999986996999966788167899897667115636678657999876589878977775757789
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780943|r 403 TCQLLVLVI 411 (608)
Q Consensus 403 taql~~l~l 411 (608)
T Consensus 194 ~g~~i~n~i 202 (247)
T PRK02947 194 VGVAILNAI 202 (247)
T ss_pred HHHHHHHHH
T ss_conf 999999999