HHsearch alignment for GI: 254780943 and conserved domain: PRK03868

Probab=97.91  E-value=0.00017  Score=50.33  Aligned_cols=96  Identities=17%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEE-----EECCHHHC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             356551035203654307999999998625667314-----30420100-123344555057752678818999999998
Q gi|254780943|r  287 FANISGLLVSSCGTSYLAGLVGKFWFERLARLKVEI-----DVSSEFRY-RDFVYSSKWASLFISQSGETADTLASLRYM  360 (608)
Q Consensus       287 ~~~~~~I~~vGcGTSy~Aal~~~~~~e~~~~i~v~v-----~~asEf~y-~~~~~~~~tlvI~iSQSGeT~dti~Al~~a  360 (608)
T Consensus        55 ~~~~~~vV~IGIGGS~LG~~ai~~aL~~~~~~~~~i~F~~N~Dp~~~~~~l~~l~~~~TlfiViSKSgtT~ET~~~~~~~  134 (409)
T PRK03868         55 KQAIKNIVVIGIGGSSLGVKAIYSMLKNKKQLKRELHFLDNTDPISINKTLKKINLEETLFIVISKSGTTIETISIFKYI  134 (409)
T ss_pred             HCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf             52498799982552889999999984120458974999848898999999960893517999985999838999999999


Q ss_pred             HHC-------CCCEEEEECCCCCCCCCCCC
Q ss_conf             630-------24424651178763100024
Q gi|254780943|r  361 RTQ-------GLTIGSLVNVLESTIARESD  383 (608)
Q Consensus       361 k~~-------g~~tiaItN~~~S~la~~aD  383 (608)
T Consensus       135 ~~~~~~~~~~~~~~i~iTd-~~s~L~~~a~  163 (409)
T PRK03868        135 LEHFKLDKLELKNFLVITD-PDSPLEQFAK  163 (409)
T ss_pred             HHHHCCCCCCCCCEEEEEC-CCHHHHHHHH
T ss_conf             9972455330025799936-8416665444